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EBI DbfetchID AB018795; SV 1; linear; genomic DNA; STD; PRO; 1896 BP. XX AC AB018795; XX DT 27-OCT-1998 (Rel. 57, Created) DT 27-OCT-1998 (Rel. 57, Last updated, Version 1) XX DE Halomonas marina gene for alginate lyase, complete cds. XX KW alg; alginate lyase. XX OS Cobetia marina OC Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; OC Halomonadaceae; Cobetia. XX RN [1] RP 1-1896 RA Ooi T., Kraiwattanapong J., Kinoshita S.; RT ; RL Submitted (19-OCT-1998) to the EMBL/GenBank/DDBJ databases. RL Toshihiko Ooi, Hokkaido Graduate University, Faculty of Engineering, RL Department of Molecular Chemistry; N-13, W-8, Kita-ku, Sapporo, Hokkaido RL 060-8628, Japan (E-mail:ooi@moby.hokudai.ac.jp, Tel:+81-11-706-6611, RL Fax:+81-11-706-6611) XX RN [2] RA Kraiwattanapong J., Ooi T., Kinoshita S.; RT "Alginate lyase gene from Deleya marina"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..1896 FT /organism="Cobetia marina" FT /strain="N-1" FT /mol_type="genomic DNA" FT /db_xref="taxon:28258" FT CDS 303..1427 FT /codon_start=1 FT /transl_table=11 FT /gene="alg" FT /product="alginate lyase" FT /db_xref="GOA:Q9ZNB7" FT /db_xref="InterPro:IPR008397" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZNB7" FT /protein_id="BAA33966.1" FT /translation="MRNPKLKNLLAPTLLSLAMFAGATQAAAPLRPPQGYFAPVDKFKT FT GDKSDGCDAMPAPYTGPLQFRSKYEGSDKARATLNVQSEKAFRDTTKDITTLERGTAKR FT VMQFMRDGRPEQLECTLNWLTAWAKADALMSKDFNHTGKSMRKWALGSMASSYIRLKFS FT DSHPLAQHQQEAQLIEAWFSKMADQVVSDWDNLPLEKTNNHSYWAAWSVMATAVATNRR FT DLFDWAVKEYKVGVNQVDADGFLPNELKRQQRALAYHNYALPPLAMIASFAQINGVDLR FT QENNGALKRLGDRVLAGVKDPDEFEEKNGKKQDMTDLKEDMKFAWLEPFCTLYTCAPDV FT IEKKRDMQPFKTFRLGGDLTKVYDPSHEKGNKGS" XX SQ Sequence 1896 BP; 420 A; 591 C; 549 G; 336 T; 0 other; gtcgacatcc gcttcgccga cacctcggtg aaaaccctgc aagccaccct ctggtacatg 60 aacggtcgcc acgaggacat caagatcgag aaaccggaaa cctccgacac cgacggtcgt 120 ttcgcctttg agctgcgcac ggacgaagac tgggcctcgc aaaacctgct ggcggtcgaa 180 gtccagggtc ctgaagccgg acctgacgcc gcgccacaaa aagtcgaagc gaaaatctgc 240 aaacgcaacg tattcccggg cgctggtcaa cagaccgcgc agctcgggca atgaggtctg 300 ctatgcgaaa tccgaaactg aaaaacctgt tggcaccgac actactgagc ctggcgatgt 360 tcgccggggc aactcaggct gccgcgccat tgcgtccacc gcagggctac ttcgccccgg 420 tggataaatt caagaccggt gacaagagcg acggctgtga cgcgatgccg gcgccgtaca 480 ccggtccgct gcaatttcgc agcaagtacg aaggttcgga caaggcccgc gcgacgctga 540 acgtgcagtc ggaaaaagcc tttcgcgaca ccaccaaaga catcaccacg ctggaacgcg 600 gcaccgccaa gcgcgtcatg cagttcatgc gcgacggtcg cccggagcag ctcgaatgca 660 cgctcaactg gctgaccgca tgggccaagg ctgacgcgtt gatgtccaaa gacttcaacc 720 acaccggcaa gtcgatgcgc aaatgggcac tgggcagcat ggcgtcttcg tacattcgcc 780 tgaagttctc cgactcgcat ccgctggccc agcaccagca ggaagcgcag ttgatcgaag 840 cctggttcag caaaatggct gatcaggtgg tcagcgactg ggacaacctg ccgctggaaa 900 aaaccaacaa ccactcgtac tgggccgcct ggtcggtgat ggccaccgcc gtcgccacca 960 accgccgcga cctgttcgac tgggccgtca aggaatacaa ggtcggcgtc aatcaagtcg 1020 atgccgacgg cttcctgccc aacgagctca agcgccagca acgcgccctc gcctatcaca 1080 actacgccct gccgccgctg gcgatgatcg ccagtttcgc ccagatcaac ggtgtcgatc 1140 tgcgtcagga aaacaatggc gcactgaagc gtctcggtga ccgtgtattg gccggcgtga 1200 aggaccctga cgagttcgaa gaaaagaacg gcaaaaagca ggacatgact gacctgaaag 1260 aggacatgaa attcgcctgg ctcgaaccct tctgcaccct ctacacctgt gcgccggatg 1320 tgatcgagaa gaagcgcgac atgcaaccgt tcaagacctt ccgtcttggc ggcgacctga 1380 ccaaggtcta cgacccgtcg catgaaaagg gcaacaaggg ttcctgaaaa cactgatggc 1440 tgatcgttcc cacgctccgc gtgggaatgc agcccgggac gctccgcgtc ccatgccgaa 1500 gcggacgcag agcgtccatt gaggcattcc cacgcagagc gtgggaacga tcgcaggact 1560 gtttcacccc tccactacca cggggggttt gggggggctt tggcccttga ctgttggttc 1620 aaacatggag agatcgggat ggtattttca tccaacgtgt tcctgtttct gttcttgccg 1680 atctttctcg gcttgtacta cctgagcggg caacgctatc gcaacctgct gctgctgatc 1740 gccagctacg tgttctacgc ctggtggcga gtggacttcc tcgcgctgtt cgcagcggtc 1800 acgctgtgga actactggat cggcctcaag gtcggtgctg ccggcgtgcg aaccaaaccg 1860 gcgcagcgct ggctgctgct cggtgtggcc gtcgac 1896 // |
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