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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB015636; SV 1; linear; genomic DNA; STD; MAM; 1062 BP.
XX
AC   AB015636;
XX
DT   29-JUN-1998 (Rel. 56, Created)
DT   02-APR-2008 (Rel. 95, Last updated, Version 6)
XX
DE   Pongo pygmaeus FUT2 gene for alpha (1,2) fucosyltransferase, complete cds.
XX
KW   .
XX
OS   Pongo pygmaeus (Bornean orangutan)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pongo.
XX
RN   [1]
RP   1-1062
RA   Koda Y.;
RT   ;
RL   Submitted (16-JUN-1998) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Yoshiro Koda Kurume University, School of Medicine, Department of
RL   Forensic Medicine; Asahimachi 67, Kurume, Fukuoka 830-0011, Japan
XX
RN   [2]
RA   Koda Y., Tachida H., Soejima M., Takenaka O., Kimura H.;
RT   "The old origin of a null allele se428 of the human ABO-secretor type
RT   alpha(1,2) fucosyltransferase gene (FUT2)";
RL   Unpublished.
XX
RN   [3]
RA   Kelly R.J., Rouquier S., Giorgi D., Lennon G.G., Lowe J.B.;
RT   "Sequence and expression of a candidate for the human secretor blood group
RT   alpha(1,2) fucosyltrabsferase gene (FUT2)";
RL   J. Biol. Chem. 270:4640-4649(1995).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1062
FT                   /organism="Pongo pygmaeus"
FT                   /mol_type="genomic DNA"
FT                   /note="common name: Bornean orangutan"
FT                   /db_xref="taxon:9600"
FT   CDS             1..1032
FT                   /codon_start=1
FT                   /gene="FUT2"
FT                   /product="alpha (1,2) fucosyltransferase"
FT                   /note="Similar to human secretor type alpha (1,2)
FT                   fucosyltransferase"
FT                   /db_xref="GOA:O77487"
FT                   /db_xref="InterPro:IPR002516"
FT                   /db_xref="UniProtKB/Swiss-Prot:O77487"
FT                   /protein_id="BAA31129.1"
FT                   /translation="MLVVQMPFSFPVAHFILFVFTVSTIFHIQQRLAKIQAMWELPEQI
FT                   PVLASTSKALGPSQLRGIWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLA
FT                   PIFRITLPVLHSTTASRIPWQNYHLNDWMEEKYRHIPGEYVRLTGYPCSWTFYHHLRHE
FT                   ILQEFTLHDHVREEAQKFLRGLQVNGSQPSTFVGVHVRRGDYVHVMPKVWKGVVADRRY
FT                   LQQALDWFRARYSSPIFVVTSNGMAWCQENIDTSHSDVVFAGDGIEGSPAKDFALLTQC
FT                   NHTIMTIGTFGIWAAYLAGGDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPL
FT                   LKH"
XX
SQ   Sequence 1062 BP; 222 A; 340 C; 283 G; 217 T; 0 other;
     atgctggtcg ttcagatgcc tttctccttt cccgtggccc acttcatcct gtttgtcttt        60
     acggtgtcca ctatatttca cattcagcag cggctagcga agattcaagc catgtgggag       120
     ttaccggagc agataccagt gctagcctca acatcaaagg cactgggacc cagccagctc       180
     agggggatat ggacaatcaa tgcgataggc cgcctgggga accagatggg tgagtacgcc       240
     acgctgtacg ccctggccaa gatgaacggg cggcccgcct tcatcccggc ccagatgcac       300
     agcaccctgg cccccatctt cagaatcacc ctgccggtgc tgcacagcac cacggccagc       360
     aggatcccct ggcagaacta ccacctgaac gactggatgg aggagaagta ccgccacatc       420
     ccaggggagt acgtccgcct cacgggctac ccctgctcct ggaccttcta ccaccacctc       480
     cgccacgaga tcctccagga gttcaccctg cacgaccacg tgcgcgagga ggcccagaag       540
     ttcctgcggg gcctgcaggt aaatgggagc cagccgagca cctttgtagg ggtccatgtt       600
     cgccgagggg actatgtcca tgtcatgcca aaagtgtgga agggggtggt ggccgaccgg       660
     cgatacctac agcaggccct ggactggttc cgagctcgct acagctcccc catcttcgtg       720
     gtcaccagta atggcatggc ctggtgtcag gagaacattg acacctccca cagtgatgtg       780
     gtgtttgctg gcgatggcat tgagggctca cctgccaaag attttgctct actcacacag       840
     tgtaaccaca ccatcatgac catcgggaca ttcgggatct gggccgcata ccttgcgggt       900
     ggggacacca tctacctggc caattacacc ctccccgact cccctttcct caaaatcttt       960
     aagccagagg cagccttcct gccggagtgg acggggattg ccgcagacct gtccccctta      1020
     ctcaagcact aatgctggcc cgttctttga gaacttttct cc                         1062
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