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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB011839; SV 1; linear; genomic DNA; STD; PRO; 1245 BP.
XX
AC   AB011839;
XX
DT   10-DEC-1999 (Rel. 62, Created)
DT   04-MAY-2000 (Rel. 63, Last updated, Version 2)
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DE   Bacillus sp. gene for pectate lyase, complete cds.
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KW   pectate lyase.
XX
OS   Bacillus sp.
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN   [1]
RP   1-1245
RA   Hatada Y.;
RT   ;
RL   Submitted (05-MAR-1998) to the EMBL/GenBank/DDBJ databases.
RL   Yuji Hatada, Kao Corporation, Tochigi Research Laboratories; 2606 Akabane,
RL   Ichikai, Haga-gun, Tochigi 321-3497, Japan (Tel:0285-68-7400,
RL   Fax:0285-68-7403)
XX
RN   [2]
RP   1-1245
RA   Hatada Y., Koike K., Saito K., Kobayashi T., Susumu I.;
RT   "Amino acid sequence and possible Catalytic residues of a novel alkaline
RT   pectate lyase from alkaliphilic Bacillus";
RL   Unpublished.
XX
RN   [3]
RX   DOI; 10.1046/j.1432-1327.2000.01243.x
RX   PUBMED; 10759850.
RA   Hatada Y., Saito K., Koike K., Yoshimatsu T., Ozawa T., Kobayashi T.,
RA   Ito S.;
RT   "Deduced amino-acid sequence and possible catalytic residues of a novel
RT   pectate lyase from an alkaliphilic strain of Bacillus";
RL   Eur. J. Biochem. 267(8):2268-2275(2000).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1245
FT                   /organism="Bacillus sp."
FT                   /strain="KSM-P15"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1409"
FT   CDS             360..1034
FT                   /transl_table=11
FT                   /product="pectate lyase"
FT                   /db_xref="GOA:Q9RHW0"
FT                   /db_xref="InterPro:IPR004898"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="PDB:1EE6"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RHW0"
FT                   /protein_id="BAA87892.1"
FT                   /translation="MKKLLGLILSAALTLSLYGLEPQVAEAAPTVVHETIRVPAGQTFD
FT                   GKGQTYVANPNTLGDGSQAENQKPIFRLEAGASLKNVVIGAPAADGVHCYGDCTITNVI
FT                   WEDVGEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRNFRADDIGKLVRQNGG
FT                   TTYKVVMNVENCNISRVKDAILRTDSSTSTGRIVNTRYSNVPTLFKGFKSGNTTASGNT
FT                   QY"
XX
SQ   Sequence 1245 BP; 319 A; 271 C; 358 G; 297 T; 0 other;
     ctgcacagcc ggttggtttc atttctcctg ttcataagcg atatccatat catatcaaac        60
     cctgattaca tcagggtgaa cattccctaa cgttttcctt aacaaccgca agccgatgat       120
     gaacagatcg gatatcgact gtaattgaac ggatgatttt cgcagtttta tgcagagaag       180
     gtttgtttat cgcgaccatt tcttattctg atataatgat tattcctgtt atggaattat       240
     tttgataata tgagaacgga ttcatacgag gtgcacatcg ctatgatatc cgctttaact       300
     aggaaggggc tggtagagaa ccgtacgaat catcaccata acgaaaggat ggatggatta       360
     tgaagaagtt gctcggtttg attttgtctg cagcgctgac gttgtctctg tacggtcttg       420
     agcctcaggt tgcggaggcg gcgccgacgg tcgttcatga aacgattcgt gtgcctgccg       480
     gtcagacgtt tgacggaaaa gggcagacct atgtggctaa tccgaataca ttgggggacg       540
     gatcgcaggc ggagaatcag aagccgatct ttcgtctgga ggctggggca agcctgaaaa       600
     atgtagtgat tggcgctcct gccgctgacg gggtgcactg ctacggggat tgtacgatta       660
     caaatgtcat ctgggaggat gttggtgagg atgcgctgac gcttaaatcg tccggaacgg       720
     tgaacatctc gggcggggca gcctacaagg cgtatgacaa ggtgttccaa atcaatgcag       780
     cggggacgat caacattcgt aacttcaggg ccgatgacat cgggaagctg gttcggcaga       840
     acggaggcac cacctacaaa gtggtgatga acgtggaaaa ctgcaacatt tccagagtga       900
     aggatgcgat cctgagaacg gacagcagca caagcacagg acgaattgtg aatacccgct       960
     attctaacgt gccaacattg ttcaaaggct ttaaatcagg caataccacc gcatccggaa      1020
     atacgcagta ttaagcctga gcctcagggg tagacgagga cacaagaagg agccgccaag      1080
     ggctgatttt cagcctttgg cggcttttgg gtctggccag cttgatatgc tctcaggaag      1140
     cgttatgccg ggaacacgcg gcagggcgag gacgaggacg agggccatcc tgtcaggcgt      1200
     tagctgcctg cgtgtgtaag cgccagatgc tgtctgcggt aagcg                      1245
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