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EBI DbfetchID AB008015; SV 1; linear; mRNA; STD; PLN; 2903 BP. XX AC AB008015; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana RXF12 mRNA, complete cds. XX KW RXF12; xylan endohydrolase. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-2903 RA Kato A., Suzuki M., Komeda Y.; RT ; RL Submitted (08-OCT-1997) to the EMBL/GenBank/DDBJ databases. RL Atsushi Kato, Hokkaido University, Division of Biological Sciences, RL Graduate School of Science; Kita 10 Nishi 8, Kita-ku, Sapporo, Hokkaido RL 060, Japan (E-mail:atsushi@bio.hokudai.ac.jp, Tel:03-5449-5281, RL Fax:03-3443-9609) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5 RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX FH Key Location/Qualifiers FH FT source 1..2903 FT /organism="Arabidopsis thaliana" FT /chromosome="1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="mRNA" FT /db_xref="taxon:3702" FT CDS 38..2791 FT /codon_start=1 FT /transl_table=1 FT /gene="RXF12" FT /note="similar to xylan endohydrolase" FT /db_xref="GOA:Q9SM08" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q9SM08" FT /protein_id="BAA88262.1" FT /translation="MEVSRKDNEEPEKQNNNNVASIIGSDRTNVIVNHDFSSGMHSWHP FT NCCEAFVVTAESNVSHGVLDPSKCGSYVVVKNRKETWQGLEQDITNRVKPCSLYKVSAT FT VAVSGPVHGLVEVMATLKLESQQSQTNYQFIAKTCVFKEKWVRLEGMFSLPSLPEKVVF FT YLEGPSPGIDLLIQSVTIHRESEPELERVTAEDETIVVNPNFEDGLNNWSGRSCKIVLH FT DSMADGKIVPESGKVFASATERTQNWNGIQQEITGKVQRKRVYEATAVVRIYGNNVTTA FT TVQATLWVQNPNQRDQYIGISTVQATDKEWIHLKGKFLLNGSASRVVIYIEGPPPGTDI FT LLNSLTVKHAEKIPPSPPPSIENPAFGVNILTNSHLSDDTTNGWFSLGNCTLSVAEGSP FT RILPPMARDSLGAHERLSGRYILVTNRTQTWMGPAQMITDKLKLFLTYQISVWVKVGSG FT INSPQNVNVALGIDSQWVNGGQVEINDDRWHEIGGSFRIEKNPSKALVYVQGPSSGIDL FT MVAGLQIFPVDRLARIKHLKRQCDKIRKRDVILKFAGVDSSKFSGASVRVRQIRNSFPV FT GTCISRSNIDNEDFVDFFLKNFNWAVFANELKWYWTEPEQGKLNYQDADDMLNLCSSNN FT IETRGHCIFWEVQATVQQWIQNMNQTDLNNAVQNRLTDLLNRYKGKFKHYDVNNEMLHG FT SFYQDKLGKDIRVNMFKTAHQLDPSATLFVNDYHIEDGCDPKSCPEKYTEQILDLQEKG FT APVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMMWE FT AFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQN FT GAFPFRGYSGNYAVEVITTSSSKVLKTFGVDKEDSSQVITVDLQGL" FT polyA_site 2903 FT /note="14 a nucleotides" XX SQ Sequence 2903 BP; 880 A; 562 C; 694 G; 767 T; 0 other; cggagatcga aatccagaca agaaatcaag agaaagcatg gaggtttcaa gaaaagacaa 60 tgaagagcct gaaaaacaga acaacaacaa tgtagcatct ataattggtt ctgatcgcac 120 caatgtaatt gtgaatcatg acttctcttc cgggatgcat tcgtggcatc cgaattgctg 180 tgaggccttt gttgtcaccg ctgagtctaa tgtctctcac ggtgttttag acccgtcaaa 240 gtgtggtagc tatgtagttg tcaagaacag gaaagaaact tggcaaggct tggagcaaga 300 catcacaaac agagtaaaac cttgtagtct ttataaagtt tcagcaactg ttgctgtctc 360 tggaccggtg catggattgg tggaggttat ggccaccttg aagctcgaaa gccaacaatc 420 tcaaacaaac tatcagttca tagcaaaaac ttgtgtcttc aaggagaagt gggtgagact 480 agaaggcatg ttctcgttac ctagcttacc agaaaaagtt gtattctatt tggaaggccc 540 gtcaccgggg atcgatcttc tcatacagtc tgttaccatc caccgcgaaa gcgagcctga 600 gctggagcgt gttactgctg aagatgagac tattgtagtg aacccaaact ttgaagatgg 660 actaaataac tggtctggga gaagctgcaa gattgtgttg catgactcaa tggctgatgg 720 aaagatagta ccagaatccg ggaaggtttt cgcttcggct acagaacgca cgcagaactg 780 gaacggtatt cagcaagaga tcaccgggaa agttcagaga aaacgtgtat atgaagcaac 840 cgcggttgtt cgtatttatg gaaacaatgt gacaacagct actgtacaag ctactctatg 900 ggtccaaaat ccaaatcaac gtgatcaata cattggcatt tccactgtgc aagcaacaga 960 caaagagtgg atacatttga aagggaagtt cctcctcaac ggttctgcat cgcgggtagt 1020 catttacatc gaaggtccac ctccaggaac cgatattctt ctcaatagct taactgtaaa 1080 acacgccgag aaaattcctc cttcaccacc cccgtctatt gagaatcctg catttggagt 1140 aaacatactc acaaatagtc atttaagtga tgatacgacc aacggatggt tttcattagg 1200 gaactgcacg ctaagtgtgg cggaagggtc acctcggatc cttcctccga tggcaagaga 1260 ctcgcttgga gcacacgagc gtctaagtgg ccgctatata cttgtgacta accgaacaca 1320 gacatggatg ggtccagcac aaatgatcac tgataaactt aagcttttct tgacgtacca 1380 aatatcagtt tgggtcaaag ttggttctgg cattaatagt ccgcaaaatg ttaatgtcgc 1440 acttggtatc gatagccaat gggtaaatgg aggacaggta gagatcaacg atgatagatg 1500 gcatgaaatt ggcggttctt ttcgaattga gaagaaccca tctaaggctt tggtttacgt 1560 tcaaggccct tcttccggca ttgatctcat ggtcgcggga ttgcagattt ttcccgtcga 1620 tcgactcgcg agaataaaac atttgaaaag acaatgtgac aagatccgta agcgtgacgt 1680 tatcctcaag tttgctggtg ttgattctag caaattttct ggagctagtg ttagagttcg 1740 acagataaga aatagcttcc cggtggggac ttgcattagc agatcaaata tagataacga 1800 agatttcgtc gatttcttct taaagaactt taattgggcg gttttcgcta acgaattgaa 1860 atggtactgg acggaaccag aacaagggaa gcttaattac caagacgcag atgatatgct 1920 caacttgtgc agtagcaaca acatagaaac aagaggacat tgtatctttt gggaagttca 1980 agcaactgtt cagcaatgga tccaaaatat gaaccaaacc gacttaaaca acgcggtgca 2040 aaaccgccta accgatcttc taaaccggta caagggaaaa ttcaaacatt acgacgtgaa 2100 caatgagatg ttacatggat cattctacca agataagcta ggcaaagaca ttagagtcaa 2160 catgttcaaa accgcgcacc aactagaccc atctgcgaca ttgtttgtga acgactacca 2220 catagaagac gggtgtgacc caaaatcctg ccccgaaaag tacacggaac agattcttga 2280 cttgcaagaa aagggtgcgc cggtaggagg aatcgggatt caaggccata tcgacagtcc 2340 ggtgggtcca attgtatgtt cagccctaga caaactagga attctcggtt taccaatatg 2400 gttcacagaa ttggatgtct cctcggtcaa tgagcacata agggcagatg atttggaagt 2460 aatgatgtgg gaagcttttg gacatcccgc ggtggaaggt ataatgttat ggggattttg 2520 ggagttgttt atgagcagag acaactctca tttggtgaat gcagaaggag atgttaatga 2580 agctggtaaa aggtttttgg ctgtgaaaaa agattggctc tctcatgcta atggacatat 2640 tgatcaaaac ggtgcgtttc cgtttagagg gtatagtgga aattatgccg ttgaagtgat 2700 tactacttca tctagtaagg ttctgaagac gtttggtgtt gataaggaag attcgtctca 2760 ggttattact gttgatcttc aaggtttgtg attgtgacgc ttgtacatgt gctaatgtat 2820 gtctagattt ccagtttgct gaaactgtgg tgtttattta ttgaaaacaa aataaaagtc 2880 tctcttgata gtttcattgt tct 2903 // |
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