 |
|
EBI DbfetchID AB003330; SV 1; linear; genomic DNA; STD; PRO; 2882 BP. XX AC AB003330; XX DT 06-MAY-1997 (Rel. 51, Created) DT 30-JUL-1998 (Rel. 56, Last updated, Version 2) XX DE Pseudomonas sp. gene for alginate lyase, complete cds. XX KW alginate lyase; alyll. XX OS Pseudomonas sp. OC Bacteria; Proteobacteria. XX RN [1] RP 1-2882 RA Ooi T.; RT ; RL Submitted (23-APR-1997) to the EMBL/GenBank/DDBJ databases. RL Toshihiko Ooi, Hokkaido Graduate University, Faculty of Engineering; N-13, RL W-8, Kita-ku, Sapporo 060, Sapporo, Hokkaido 060, Japan RL (E-mail:ooi@e1.hines.hokudai.ac.jp, Tel:011-706-6611, Fax:011-706-6611) XX RN [2] RA Kraiwattanapong J., Ooi T., Kinoshita S.; RT "Nucleotide sequence and expression of a gene (alyII) for an alginate lyase RT from Pseudomonas sp. OS-ALG-9"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..2882 FT /organism="Pseudomonas sp." FT /strain="OS-ALG-9" FT /mol_type="genomic DNA" FT /db_xref="taxon:306" FT CDS 389..2530 FT /codon_start=1 FT /transl_table=11 FT /gene="alyll" FT /product="alginate lyase" FT /note="The gene has activity as alginate lyase in E.coli." FT /db_xref="GOA:O05937" FT /db_xref="InterPro:IPR012480" FT /db_xref="UniProtKB/TrEMBL:O05937" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="BAA19848.1" FT /translation="MNYLKKVVLVSFCAFFSLSLMAQTHPSIMLTKANVAAVKKGVNTY FT PLLRQSYQAVKNAADKALAQPIVVPVPKDGGGGYTHEQHKKNYSNMLNCGVAYQISGEK FT KYADYVKNVMLNYASQYGKWPLHPKRKSEEDGGRIFWQSLNDFVWQLYTIQAYDLVYDG FT IPATDRKTIEEKLFVPILKFFTEDRYDVFNKIHNHGTWNLAAVGITGYVLNKREYVEMA FT IKGSKKDGKTGYLAQIDQLFSPDGYYMEGPYYQRYALLPFVLFAKAINNYEPSRKIFEY FT RDKLLSKAIHTSLQTSYTDKTFFPLNDAIKDKTYESVELVYGVDLAYADIKAEVDLLDI FT ARQQNRVIVSDAGLKVAADLAAGKAVPFKYQTLWIRDGGKGDEGGLGILRNGPNTDQQC FT VVLKAASQGMGHGHFDRLNLLFYDNTTEIFPDYGAARFLNIDTKNGGGYLPENNTWAKQ FT TVAHNALVVDQTSHFNAKLGPADKASPTLLYFSNQPNLKVVSAKEDKAYTDVTMLRTSA FT LVKVEGLDKPLLIDVMQAQSAKSHQYDLPFWYKGQLVNTSFPVTAKANQLTALGDKNGY FT QHIWLNASNPLEGKSGMVGLLNKNRFYTTHFVSDNPLEVKLLSIGANDPEMNLVDGKAF FT MLSSSGQNQTFVSITETHGGTDPINETVSSALPTVSGLKLIKSDAQQTIISFKVNERTY FT TYQINYTEKQQLYIIKIKE" XX SQ Sequence 2882 BP; 949 A; 554 C; 629 G; 750 T; 0 other; aagcttacga aaataaggtt ggtgccggtg gcgatgccgt agaggaagac atggtcttcc 60 atatcaaaat tgccaaggca accaaaaatt cggtcatcga atccatgatc ttgattttag 120 tgcctgattt gattaaaaat attgtagaaa ataaaatctg tggcgacaat agggctaaaa 180 cagctattga agagcacagg atgatttatg ccgctatcga atcgcaagat atggccaagg 240 cagaagaagc catggctggt caccttgatg agatatggca aattagtaaa gcaggttttg 300 ctgcacaaag tatcatcaac gaaacagaga gataattcga taaaataggt ccatcctagc 360 ttaatcaatt aaatataaat tcaagcgtat gaactactta aaaaaagtgg tattagtatc 420 tttttgtgcc ttttttagcc tatcgctaat ggcgcaaaca catcccagca ttatgctaac 480 caaagcaaat gtggcggccg tgaaaaaagg cgtaaatacc tatccacttt tacgccaatc 540 ataccaagcg gttaaaaatg cggcagataa agcattggca caacctattg tggtacctgt 600 gcctaaagat ggcggcggtg gttatacgca tgagcagcac aaaaaaaatt acagcaacat 660 gctgaactgc ggagtagctt atcaaatctc cggagaaaag aaatatgcag actacgtgaa 720 aaacgtaatg ctcaactatg cttcgcaata tggaaaatgg ccccttcatc caaaaagaaa 780 aagtgaggaa gatggtggac gtattttttg gcaaagcctg aacgactttg tatggcagct 840 atataccata caagcttatg atttggttta tgacgggatt cctgcaactg acaggaaaac 900 cattgaagaa aaattgttcg tgcctatcct caagtttttt accgaagata ggtacgacgt 960 cttcaacaaa atccacaatc atggtacctg gaatttggcg gctgttggta ttacaggtta 1020 cgtgctcaac aaacgtgagt acgtagaaat ggctattaaa ggctctaaaa aggatggtaa 1080 aaccggctac ttggcgcaaa tagaccaact gttttcgcct gatggttatt atatggaagg 1140 cccgtattat cagcgttacg ccttattgcc tttcgtattg tttgccaaag cgatcaacaa 1200 ttacgagcct tcacgcaaaa ttttcgaata cagggacaaa ttgctttcaa aggcaatcca 1260 tacctcattg caaacttctt acaccgataa aactttcttt ccgttaaacg atgccatcaa 1320 ggacaaaacc tacgagtcgg tggaattggt atatggagtt gatttggctt atgccgatat 1380 taaggcagag gttgatttgc tggacattgc caggcagcaa aaccgcgtaa ttgtttctga 1440 tgcgggctta aaggtagcgg cagatttggc agctggaaaa gcagttccat ttaaatacca 1500 aacgttgtgg attagagatg gaggtaaagg cgatgaaggt ggattgggta ttttacgtaa 1560 cggtccaaac accgatcagc aatgtgtggt gttgaaagct gcttcacaag gaatgggcca 1620 cgggcacttt gaccggttaa acctattatt ttacgataac actaccgaaa ttttccccga 1680 ttatggcgca gctagatttt taaatatcga tactaaaaat ggtggtggtt acttgcccga 1740 aaacaatact tgggcaaaac aaacggtagc ccataatgcc ttggtggtag accaaacttc 1800 acactttaat gccaaattgg ggccagcaga taaagccagc ccaaccttgc tatacttttc 1860 aaaccagcca aatttaaaag tggtgagcgc taaagaagac aaagcttata ccgatgtgac 1920 catgctaaga acttcggcat tggtaaaagt tgaaggtttg gataagcctt tgttaattga 1980 tgtgatgcag gcgcaatcag ccaaaagtca tcagtacgat ttgccgtttt ggtacaaagg 2040 acaattggta aacacttcgt tccctgttac ggcaaaagcg aatcagttaa ccgcacttgg 2100 agataaaaat ggctatcaac acatttggtt aaacgccagc aatccattgg agggcaaatc 2160 gggaatggta ggtttgttga acaaaaatcg tttctacacc acacattttg tgtctgataa 2220 tccactagaa gtgaagttac tttctatagg tgccaatgat ccggaaatga acttggtgga 2280 tggcaaggca ttcatgctat caagcagtgg ccaaaatcaa acctttgtga gcattacaga 2340 aacgcatggc ggtacagatc caatcaatga aacggtttca tcggctttgc caacagtgag 2400 cgggctaaag ttgattaaat cagatgcaca acaaaccatt atcagcttta aggttaatga 2460 aaggacctat acctatcaga tcaactatac agagaaacag caattatata tcattaagat 2520 aaaggaataa agaacaaaga gtaaagactt tcatcgccgc ttttctcttc cttctgggga 2580 tagggtttgg tgactagata tagtatctgc gatctaaaca acaaaacatc caaaaaacaa 2640 aaaaactata aaatgcaaag cgaattattt caaatagaaa cagaaaccac ttgggaagat 2700 ttaggtaacg gtgttcaacg taaaatctac ggttatgatg atcaaatcat gctcgtgaaa 2760 gccaaatttg aggcaggagc catcggtccc ttgcacgagc attaccgccg atgaaaccgt 2820 ttcattgatt ggatctgtac cgccatgcgt ttctgtaatg ctcacaaagg tttgattttg 2880 gg 2882 // |
|