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EBI DbfetchID AB001348; SV 1; linear; genomic DNA; STD; PLN; 4428 BP. XX AC AB001348; XX DT 05-JUL-1997 (Rel. 52, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 5) XX DE Oryza sativa Japonica Group gene for betaine aldehyde dehydrogenase, DE complete cds. XX KW betaine aldehyde dehydrogenase. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-4428 RA Nakamura T., Yokota S., Muramoto Y., Tsutsui K., Oguri Y., Fukui K., RA Takabe T.; RT ; RL Submitted (21-FEB-1997) to the EMBL/GenBank/DDBJ databases. RL Contact:Tetsuko Takabe Nagoya University, BioScience Center; Chikusa, RL Nagoya, Aichi 464-01, Japan XX RN [2] RX DOI; 10.1046/j.1365-313X.1997.11051115.x RX PUBMED; 9193078. RA Nakamura T., Yokota S., Muramoto Y., Tsutsui K., Oguri Y., Fukui K., RA Takabe T.; RT "Expression of a betaine aldehyde dehydrogenase gene in rice, a RT glycinebetaine nonaccumulator, and possible localization of its protein in RT peroxisomes"; RL Plant J. 11(5):1115-1120(1997). XX FH Key Location/Qualifiers FH FT source 1..4428 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /db_xref="taxon:39947" FT CDS join(1..115,229..371,1112..1192,1279..1427,2048..2140, FT 2222..2345,2467..2532,2679..2745,2917..2993,3064..3177, FT 3490..3567,3652..3803,3880..3940,4078..4184,4338..4428) FT /codon_start=1 FT /product="betaine aldehyde dehydrogenase" FT /db_xref="GOA:O24174" FT /db_xref="HSSP:1O04" FT /db_xref="InterPro:IPR015590" FT /db_xref="UniProtKB/Swiss-Prot:O24174" FT /protein_id="BAA21098.1" FT /translation="MAAPSAIPRRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAAT FT AEDVELAVSAARDAFGRDGGRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGK FT PLDEAAGDMEDVAACFEYYADLAEALDGKQRAPISLPMENFESYVLKEPIGVVGLITPW FT NYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGTE FT AGAPLASHPHVDKIAFTGSTETGKRIMITASQMVKPVSLELGGKSPLIVFDDVDIDKAV FT EWAMFGCFANAGQVCSATSRLLLHEKIAKRFLDRLVAWAKSIKISDPLEEGCRLGSVVS FT EGQYQKIMKFISTARCEGATILYGGARPQHLKRGFFIEPTIITNVSTSMQIWREEVFGP FT VICVKEFRTEREAVELANDTHYGLAGAVISNDLERCERISKAIQSGIVWINCSQPCFVQ FT APWGGNKRSGFGRELGQWGLDNYLSVKQVTKYCSDEPYGWYRPPSKL" FT exon <1..115 FT /number=1 FT exon 229..371 FT /number=2 FT exon 1112..1192 FT /number=3 FT exon 1279..1427 FT /number=4 FT exon 2048..2140 FT /number=5 FT exon 2222..2345 FT /number=6 FT exon 2467..2532 FT /number=7 FT exon 2679..2745 FT /number=8 FT exon 2917..2993 FT /number=9 FT exon 3064..3177 FT /number=10 FT exon 3490..3567 FT /number=11 FT exon 3652..3803 FT /number=12 FT exon 3880..3940 FT /number=13 FT exon 4078..4184 FT /number=14 FT exon 4338..4428 FT /number=15 XX SQ Sequence 4428 BP; 1151 A; 870 C; 965 G; 1442 T; 0 other; atggccgcgc cgtcggcgat cccccgccgc ggcctgttca tcggcggcgg gtggcgggag 60 ccgtccctcg gccgccgcct ccccgtcgtc aacccggcca cggaggcaac catcggtact 120 ccgtcccttt gcttttgccc cccatatccc cttcgcccgc atttggtttg ctccatccca 180 agcacgggat tccggttaat ttgtttgtgg gttttgtgat cggtgaaggt gacatcccgg 240 cggccacggc ggaggacgtc gagctcgcgg tgtcggcggc gagggatgcg ttcggccgcg 300 acggtgggag acactggtcg cgcgcgcctg gggccgtgcg ggccaagtac ctcaaggcga 360 tcgccgctaa ggtgctcagc ttctatgcct cctaatcctg ctattagttt ggactttgga 420 gctagatgag ttgttgagca gagctctcct atgctgctaa cctgctactt ccaccttgct 480 gtgtgactga aacttacttt cggggattga ttaaaggacg ctcttagtgc cgtaaactgc 540 ttctcaaatt aggttgatca actcgggttt agtattgaaa agaaaattca tacttatgtc 600 ccatttttat tgcaagtcgg tattttactt ctgttgtata tgatcatagg aagggggtgc 660 acataacaat atattaggaa cagtaggaaa aattggaaca acatatcagg aacagtgaaa 720 aatcatggct agtttagtct agcggaaatt atgtttactg gaagctgtca atgggtagca 780 gatgagattc tccactaaag acaatgttga cttgcccttg ctgttacaac gagttcactg 840 ttgattatct ttgaacaatg ggtttctcag acttcagttt ttacagatgg aagctttctc 900 agattgaatg ttatttccag tatgtttact tagtttaccc tttttgctga actttaaatg 960 gaaagcccca aggctgaaat ttttgttatg atgagaagcc catagtataa cttgatcggt 1020 gcttttaaca attggtgccc accctgtcat tagtattttt gtttgttata accggcagta 1080 catttattga aatgttgtga actggctgca gattaaagat aagaaatctt atctagcttt 1140 gttggagact cttgattctg ggaagcctct ggatgaagca gctggggaca tggtatgcat 1200 tattattcac actatggttt ttagcatgac acaagatttt ccgtgcttta tttgatgcct 1260 tggccttgtt aattttagga ggatgtcgct gcatgctttg agtattatgc tgatctggca 1320 gaagctttag atgggaaaca acgggcacca atctctctac ccatggaaaa ttttgagtcc 1380 tatgtactca aagaacccat tggggttgtt ggacttatca ctccctggta taagaaatac 1440 ataccttgcc ttgaaaaatt gatactgttt aattgtatca tagtatattt ttttggcttc 1500 tgggatgttg tagtgtatcg aaatactttg acacgtccaa tttccctcgt cttattagac 1560 tcaaggtgtt ttgttcacac cggaagcaat tgttcttatt tcagtctttt catgcttttg 1620 ttggttcatg tttgataaca gaagaccaat tggaaatttc aaattcctca tgttttgcat 1680 ctgtagtttt gttttcctgt cagaggaaag actattaaca aaatatcatg atccttttgt 1740 attgtttacc ttttgtacgt gatcatccaa taactttgaa gttgatcttc ccaagccccc 1800 ttcaggtatt cataccaatc taaaactcta aaagtgctat gttgatccat aaaaaatagt 1860 ggtggcgttc attgccacct gttgattcct atcacatgag tacagacatg cacccctata 1920 acatattgat gttttccgtg tttcattgct ttgtgtaaat gcgctttagg cttatgagat 1980 aaagaaattt gagttatagt aaaaggctaa tcgtttggat tattttctta ttcatgcaca 2040 catgaaggaa ttatcctctg ctgatggcta cttggaaggt tgcacctgcc ctggctgctg 2100 ggtgtacagc tgtattaaag ccatctgagc ttgcttccct gtaaggatct aaggattgat 2160 catttacaat tcatttatgc aaggtttgta ccccatgact aaaaatatgt ttttaaacca 2220 ggacatgttt agagcttggt ggaatatgtg cagaaattgg attacctcca ggagtcttga 2280 acataattac tggtctgggc actgaagctg gtgctccatt agcttcacat ccccatgtgg 2340 ataaggtcag acctcttcct aatatgtact acattcatgt gcttacaaac acactgacag 2400 agtatcacat atttttaagt gactacccta agttgttttt gaattttatg tggatccttt 2460 ctgtagattg cttttactgg aagcacagaa actggtaaga ggataatgat tactgcttcc 2520 caaatggtca aggtttgttc tctatatatg atcatgccct gaagagaatt tctaataact 2580 tctgacattg aatgcttctg tcggagcaag aaacctgtgc attatgcctt gatgtcctcg 2640 taagtctaat tatattgtgc tttttttttc ttgaacagcc tgtttcgtta gagcttggtg 2700 gcaaaagtcc tcttattgtc tttgatgatg ttgatattga taaaggtatt aggtatcttc 2760 cactctccag ctttcccacg tcaactatgc tcctaattca attatgcgat gttgtcaaac 2820 cacttgtttt ttgtttaatt cattacctgc aattctgtag ttattcaagt aagtattgct 2880 agctaattgt atgtgtatgt gctaaatttg aaacagctgt tgagtgggcc atgtttgggt 2940 gttttgcgaa cgctggtcaa gtctgcagtg ctacttctcg tctacttttg catgtacgta 3000 tgttcttctg cttattttac agcttaagtc atgtcctcgt acatgacatg aagatatgca 3060 caggagaaaa ttgcaaagcg attcttggat aggttggttg catgggcaaa gagtatcaaa 3120 atctcagatc cactagaaga aggttgcagg ctggggtcag tcgttagtga agggcaggta 3180 atgtaaatag cttattgcag ctcctgaagt tcagttgcaa atattcattt ctcttgtgaa 3240 gtgtgaacct gtgaactttg atgaatattt cacgtcattc aaaacaaaat tattgctcaa 3300 gataatagtg aaatactaaa aatgcatgta acagtaatag tttacttctt tggaaattgc 3360 ttttcttgca aatattgtat tctgcagcca tgcctttcta tacagcctta gataccttgt 3420 catctgaata actgcatcat tatgtaattc ggtaactcgg acgacttaag aacctttttc 3480 tcatttcagt atcaaaaaat aatgaagttc atctcaacag caagatgtga aggtgccaca 3540 attctatatg ggggtgcccg accacaagta tgtatcctta gacttcaagt tacattagtc 3600 cttggttcct cagtatttga tcctaaccaa gctaaattgg tgtactgaca gcacctcaaa 3660 agggggttct ttattgagcc tactattata acaaatgtta gcacatcaat gcaaatttgg 3720 cgagaggaag tctttggacc ggtcatctgc gttaaagaat ttaggacaga gcgtgaagca 3780 gtagaacttg caaatgatac tcagtgagtt gctttatgtg gaactgtgga aaaaaaaatt 3840 aagcctgttc ttgtcttttt aatctgcttc ttttctcagc tatggtctag ctggcgctgt 3900 gatttccaat gatctagaga ggtgcgagcg catttcaaag gtaattttgg gttgaattac 3960 gacgtgccta tcaattttac ccttgactaa atagctggga ccctgggatg atgataacct 4020 ggtaatgaaa tggatgtatt tgatctcata aatccacaat acatgtgaaa cctgcaggct 4080 atccagtcag gtatcgtttg gataaattgc tcgcaaccat gctttgttca agctccatgg 4140 ggagggaaca agcggagtgg ttttggccgg gagctaggac agtggtgagt ctattactat 4200 acttatttag aacagtaaac tcatacaaat gtgataagca gttaatccgc agtgcttgat 4260 gtcacaaact gtggccaact gaacaagcat tggctgtgca atctacatcc tctgaaatgt 4320 ctttgcttat gcttcagggg cctcgataac tacttgagcg tgaagcaagt caccaagtac 4380 tgctcagatg aaccatacgg atggtaccgg cctccatcca agctgtag 4428 // |
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