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EBI Dbfetch

ID   EDX12030; SV 1; linear; genomic DNA; ANN; INV; 5106 BP.
XX
PA   CM000364.1
XX
DE   Drosophila simulans GD19954
XX
OS   Drosophila simulans
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
OX   NCBI_TaxID=7240;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..5106
FT                   /organism="Drosophila simulans"
FT                   /chromosome="3R"
FT                   /strain="mixed"
FT                   /mol_type="genomic DNA"
FT   CDS             join(CM000364.1:3703829..3704017,
FT                   CM000364.1:3706073..3706921,CM000364.1:3707047..3707591,
FT                   CM000364.1:3707696..3708369,CM000364.1:3708404..3708612,
FT                   CM000364.1:3708681..3708815,CM000364.1:3708987..3709430,
FT                   CM000364.1:3709819..3710070,CM000364.1:3710143..3710473,
FT                   CM000364.1:3711594..3711713,CM000364.1:3712827..3714184)
FT                   /codon_start=1
FT                   /gene="Dsim\GD19954"
FT                   /locus_tag="Dsim_GD19954"
FT                   /product="GD19954"
FT                   /note="GD19954 gene product from transcript GD19954-RA;
FT                   unusual splice; nonconsensus splice site; Dsim\GD19954-PA"
FT                   /db_xref="GOA:B4R0A5"
FT                   /db_xref="InterPro:IPR013761"
FT                   /db_xref="UniProtKB/Swiss-Prot:B4R0A5"
FT                   /protein_id="EDX12030.1"
FT                   /translation="MTRGSCILSLVLAYCAFPADQNGQRRWSLLFYTDVSRFYGSIFLQ
FT                   VETRCAGTAKIAMQHRERIITPTRSLVLCAESRREMEDWLGSLKTATAPQRPRGDSFLI
FT                   EQHDILSNHHHWYATSHARPTYCNVCRDALSGVTSHGLSCEVCKCKVHKRCAAKSIANC
FT                   KWTTLASVGKDIIEQADGIIMPHQWMEGNLPVSSMCAVCKKTCGSVLRLQDWRCLWCRA
FT                   TVHVACRPQMAVACPIGPAKLSVVPPTSVHSISTDDAWDVASPKGNFSPLLVFVNSKSG
FT                   DNQGVKFLRRFKQLLNPAQVFDLISTGPSLGLRLFRHFEMFRILVCSGDGSVGWVLSEI
FT                   DRFNMHKQCQVAVMPLGTGNDLARVLGWGSSCDDDTHLPQILERYESASTKMLDRWSIM
FT                   VFEKAIPVPKTPKMSISTEQEAMLTGMVTSANHHLRFIVETNDTQTLISSTRNLCDTVD
FT                   DLVCRISEHHKDDEQLAVKCDILRQKLNMLLDALQEEEIGAHSGDDLIATIRSLIARSI
FT                   PVTPGSNAYLLNPNISIEKTEKDQINSKERRNSRSLRSSEKEALQCRANSVKRAIYNVV
FT                   EHSEPGRPKRYQRKLSITPFEALKLPTNASGESTPCTSPLPIIPPINIISPTMETSRLT
FT                   CISPLPDTRRDSVDENFFNSINLPAPRQFADSRRSSGVEVIQEIEEGANGETVYRRSRM
FT                   SLTGGANIDDAGNRLSPCSDGGENTPTERKVDFLRVPIHTGEPIVDPLCDYRPHEVFEQ
FT                   KENDKEKDKPVEIDMERDTCVEKDGSVPEEKLVHTCNIQVPGVVVTPNPQNVYSSASIT
FT                   IIDTDAQTTTEQSSSDDLGGEASDVLSAISNEECSVASEIFDKQDAGQTVGDIIQNMDA
FT                   SNFTHIDSPETSDETEAMPGESIMDDISSVLGHDITYALQDNTLTDDTTTLCSEHVGPP
FT                   KPPRKKSLSALSRTQAHPRRRNSSPPRIARLARMDSDDNPQQFGFENIVFEIDNRCDDQ
FT                   KMREPPRYCSLAQFVEGNDIARQSFKQLMLEQHRGEDNDSEYPEHQQTPTNKGANLLAT
FT                   TSEDELSTQTAIKIEIQDIDATVRNLNSSMKPNTILTTSTSPTKKSGHGQDISVVVRPP
FT                   TPLRGDSIKPTVSLLPVSSGGAMAVSMTCSGMLGVRAMNASEIRRHSSHAPGLAVREFD
FT                   KDKDRRHSGFNPNQLTLDPEHARFLSSSPAASRRISCGSLFKVKNKKDRHQAQLRIVQR
FT                   SVLCGGRARFSPGHPGADKATDSSDLANGGGFISKCLLANADTLCAAVSPLMDPDETLL
FT                   AGYHEKCVMNNYFGIGIDAKISLDFHNKREEHPEKCRSRARNYMWYGVLGSKQLLQKTC
FT                   KNLEQRVQLECDGQRIPLPELQGIVILNIPSFMGGTNFWGSSKKDDIFLPPSFDDRVLE
FT                   VVAVFGSVQMAASRLINLQHHRIAQCQSVQINILGDEEIPIQVDGEAWLQPPGMIRILH
FT                   KNRVQMLCRNRSLELSLKSWQEKQRQHSISIQRDASSTASEHANSTDEVISERECYVLL
FT                   NFIEAVSSLVKWVKFLIISHPALQHDLYEVACRASEALESIHPQGKLLEGPSLRTKLVE
FT                   VIDSSRQLYDDACTLLRDRGHSLILREDLETKLSAALANMEMELKKCSVQKCIDGKLRA
FT                   YFNVLAPNEEVSGEILRSFEPGKYQTKSRFSRLSDTFTKLVSSVGLLISTQKLLDTVQY
FT                   INRK"
XX
SQ   Sequence 5106 BP; 1280 A; 1409 C; 1358 G; 1059 T; 0 other; 2627026403 CRC32;
     atgacaagag ggtcctgcat tttgtcgcta gttctcgcat attgcgcttt ccctgcggac        60
     cagaatggcc agcgacgttg gtctctgctg ttttatactg atgtgtcccg gttttacggt       120
     tccatttttt tgcaagtgga aactcgctgt gctggaacag cgaaaatcgc catgcaacac       180
     cgcgaacgga taatcacacc cactcgttcg ctggtgctct gcgccgagtc ccgccgcgaa       240
     atggaggatt ggctgggcag cctaaaaacg gcgacggcgc cgcagaggcc tcgtggtgac       300
     agctttctta tcgagcagca cgacatcctg tccaaccacc accactggta cgccacctcc       360
     cacgcccgcc ccacctactg caatgtgtgc agggacgccc tttccggggt cacctcccac       420
     ggactcagct gcgaggtgtg caagtgcaag gtgcacaagc gatgtgcggc caagtcgata       480
     gccaactgca agtggacaac gctagctagt gtgggcaagg acatcatcga gcaggcggac       540
     ggcatcatca tgccgcatca gtggatggag ggcaacctgc cggtgtcctc catgtgtgcc       600
     gtctgcaaaa agacctgcgg gtccgtgcta agactccagg attggcggtg cctgtggtgt       660
     cgggccaccg tccatgtggc ttgtcgtccc caaatggctg tggcctgtcc aatcggacct       720
     gccaagttgt cagtggttcc tccaaccagc gtccactcca tcagcaccga tgacgcctgg       780
     gatgtggcca gtcccaaggg caacttttcg cccctgctgg tcttcgtgaa ctccaagtct       840
     ggagacaatc aaggagtgaa gttcctgcgg cgcttcaagc agctactgaa tcctgcacaa       900
     gtctttgatc taatctctac tggtccgagt ctgggattac ggctcttccg acactttgag       960
     atgttccgta ttctggtctg ctccggtgac ggatcagtag gctgggttct tagcgagatc      1020
     gatcgcttta acatgcataa acaatgtcag gtggccgtga tgcctttagg gacgggcaac      1080
     gatctggcca gggttttggg ttggggctcg agctgcgacg acgacaccca cctgccgcag      1140
     attctagagc ggtacgagtc ggccagcacc aagatgctgg atcgatggag catcatggtc      1200
     ttcgaaaagg ctattcccgt gcccaaaaca cccaagatgt ccatcagcac tgagcaggaa      1260
     gcgatgctca ctggcatggt gacatcggcc aaccatcacc tgcgcttcat agtggaaacc      1320
     aatgacaccc agaccctgat cagctccacg cggaatctct gcgacaccgt tgacgacctg      1380
     gtctgccgca tctcggaaca ccacaaggat gacgaacagc tggccgtcaa gtgtgacatt      1440
     ctcaggcaga aacttaacat gttgctggat gctctgcagg aggaggaaat cggtgcccac      1500
     agtggcgacg atttgatagc caccatcagg agtcttattg cgagaagtat tccggtgaca      1560
     ccaggatcca acgcctacct gctcaatcca aacatatcaa tcgaaaagac ggaaaaggat      1620
     caaattaatt caaaggagcg cagaaatagt cgatcccttc gctctagcga gaaagaggct      1680
     ctccagtgtc gtgccaatag cgtcaagcga gccatctaca atgttgtgga gcactcggaa      1740
     ccaggacgtc ctaagcgcta ccagcgaaag ttgtccatca caccgtttga ggccctgaag      1800
     ctacctacaa acgcatccgg agaatcaaca ccctgcacct cccctttacc gataattcca      1860
     cccatcaata ttatctctcc caccatggaa acctcacgtc tcacctgcat ttcccctctg      1920
     cctgataccc gacgagattc cgttgatgaa aacttcttta acagcataaa tttgccggct      1980
     ccgcgtcaat ttgcggatag tcgtaggagc tctggtgtgg aagtgatcca ggagatcgag      2040
     gagggcgcca atggggagac cgtgtaccga agaagtcgca tgtccctgac cggtggagct      2100
     aatatcgatg atgccggtaa tcgtttgtca ccctgcagcg atggaggcga aaatacgccc      2160
     accgagcgca aagtggactt ccttagggtc ccgatccaca ctggcgaacc tatagtagac      2220
     cccttatgcg attatcgtcc ccacgaggtt ttcgagcaga aggaaaatga caaggagaag      2280
     gacaaacccg tggagattga catggaaagg gatacatgtg tggagaaaga cggtagcgtg      2340
     cccgaggaga agctggtgca tacatgcaac attcaggtac ccggagttgt cgttacccca      2400
     aacccccaaa atgtttactc aagcgccagc attacaatca ttgacaccga tgcacagacc      2460
     actaccgagc aatcctcttc cgatgatctg ggtggcgaag ccagcgatgt tctgtccgcc      2520
     attagcaatg aggagtgcag cgtggcctct gaaatatttg acaagcagga cgcaggacaa      2580
     accgtgggtg atatcattca gaatatggat gccagtaact ttacacacat cgactcccca      2640
     gagacgagtg atgaaacgga ggccatgcct ggcgagagca tcatggacga cataagctcg      2700
     gtattgggtc acgatataac ctatgccctg caggacaaca cgcttaccga cgacactacc      2760
     actctctgct ctgagcatgt gggaccaccg aaacctcctc gcaagaagtc attgagcgcc      2820
     ctaagccgca cccaggctca tccgcggcgg cgcaactcgt ctccaccgag aattgcgcga      2880
     ttggcgcgaa tggacagcga tgataatccg cagcaattcg gatttgaaaa tatcgttttc      2940
     gagatcgaca ataggtgtga cgaccagaag atgagggagc caccgcgcta ctgcagcctg      3000
     gcgcagttcg tggaaggtaa cgatatagcg cgtcaaagct tcaagcagct tatgctagaa      3060
     caacatcgag gtgaagacaa cgatagcgaa tatccggagc accagcaaac tccaacgaat      3120
     aaaggggcca atttactggc caccaccagc gaggacgagc tgtccacgca gacggccatc      3180
     aaaatagaaa tacaagacat tgatgccact gtgcgcaacc tcaacagcag catgaagccc      3240
     aatacgatct tgaccacgtc gacatcgccc acgaaaaaat cgggccatgg acaagatata      3300
     agtgttgttg tgaggccgcc gacgccgttg cgcggcgact ccatcaagcc cacggtatcg      3360
     ctcctgccgg tctcctccgg cggagccatg gccgtgtcca tgacctgctc cggaatgctg      3420
     ggggtgcgag ccatgaacgc ctctgagatc aggcgacact cgagccacgc ccccggcctg      3480
     gctgtccgcg agttcgacaa ggacaaggac cgccggcact ccggcttcaa tcccaaccag      3540
     ctgacactcg atccggagca cgcccgcttc ctcagcagct cgccggcggc tagtcgcagg      3600
     atcagctgcg gcagcctctt caaggtgaaa aacaaaaaag atcgccacca agcgcagcta      3660
     cggattgttc agcgttcggt tctttgtggt ggccgagcca gattttcgcc tggccaccct      3720
     ggcgctgata aggccactga ttcctctgat cttgctaatg gcggtggctt tatatccaaa      3780
     tgtctgttgg ccaatgccga taccctctgc gccgccgtca gtccccttat ggacccggat      3840
     gagacactac tagccggtta ccatgagaag tgcgtgatga acaactactt tggcatcgga      3900
     atcgatgcca agatctcgct ggacttccac aacaagcgtg aggagcaccc cgaaaagtgc      3960
     cgatctagag cccggaacta catgtggtat ggtgttctgg gatccaagca gctcctgcag      4020
     aagacctgca agaatctgga gcagcgagta cagctcgagt gcgatggtca gaggattccg      4080
     ctgccggaac tgcaggggat tgtgatactg aacataccca gcttcatggg cggcaccaat      4140
     ttctggggca gtagcaagaa ggatgacata ttcctgccgc ccagcttcga tgatcgagtg      4200
     ctagaagtgg tggctgtctt tggatcggtg cagatggctg cctcgcggct aattaatcta      4260
     caacatcatc ggatcgccca gtgccaaagc gtacagatca atatcctggg agacgaggaa      4320
     atacccattc aggtggacgg agaagcctgg cttcagccac ctggaatgat tcgcattctg      4380
     cacaagaacc gagtgcagat gctatgcagg aacagaagct tggagctctc gctgaagagc      4440
     tggcaggaga agcagcgcca gcacagcatc tccattcaga gggatgcatc ttctacagct      4500
     tcggagcatg ccaactctac ggacgaggta atctccgaac gtgaatgcta cgtgctcctc      4560
     aactttatcg aagccgtcag ctcgttggtg aagtgggtca agttcctgat tatctcacat      4620
     ccagcactgc agcacgacct atacgaggtg gcctgccggg ccagtgaagc cctggaatcg      4680
     attcatccgc agggcaaact actcgaaggt ccttcgttgc gcaccaagtt ggtggaggtc      4740
     atcgactcat cgcggcagct ttacgacgat gcatgcaccc tgctgcgcga ccgaggtcat      4800
     agtttgattc tccgtgagga tttggaaacg aagctcagcg cggcgttggc caacatggaa      4860
     atggagctga aaaagtgctc cgtgcagaag tgcattgacg gcaaactgcg ggcctacttt      4920
     aatgttctgg cgcccaacga agaggtgagt ggggaaatac tacgaagttt cgaaccaggc      4980
     aaataccaaa ccaaaagtcg attttctcga ctatcagata cctttactaa gcttgtttca      5040
     tcagtgggat tacttataag tactcagaaa ctattagata cagtgcagta tattaataga      5100
     aaatga                                                                 5106
//


  
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