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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EDR41036; SV 1; linear; genomic DNA; WGS; INV; 1020 BP.
XX
PA   AAFI02000164.1
XX
DE   Dictyostelium discoideum AX4 protein geranylgeranyltransferase type II
XX
KW   WGS.
XX
OS   Dictyostelium discoideum AX4
OC   Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.
OX   NCBI_TaxID=352472;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1020
FT                   /organism="Dictyostelium discoideum AX4"
FT                   /chromosome="5"
FT                   /strain="AX4"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AAFI02000164.1:180770..181145,
FT                   AAFI02000164.1:181247..181462,
FT                   AAFI02000164.1:181535..181962)
FT                   /codon_start=1
FT                   /gene="rabggtb"
FT                   /locus_tag="DDB_G0290671"
FT                   /old_locus_tag="DDBDRAFT_0219584"
FT                   /old_locus_tag="DDBDRAFT_0188972"
FT                   /old_locus_tag="DDBDRAFT_0233949"
FT                   /old_locus_tag="DDB_0188972"
FT                   /old_locus_tag="DDB_0219584"
FT                   /old_locus_tag="DDB_0233949"
FT                   /product="protein geranylgeranyltransferase type II"
FT                   /note="Rab geranylgeranyltransferase beta subunit"
FT                   /db_xref="GOA:B0G172"
FT                   /db_xref="InterPro:IPR001330"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0G172"
FT                   /protein_id="EDR41036.1"
FT                   /translation="MTDNINKESTTTTTTIDHTTNLLIDKHVEYIVKLGSKKDSFEYWV
FT                   TEHIRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLS
FT                   AVQILIQYDALDKIDINSVVDYVVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSL
FT                   DKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALSILNEINKIDIDKLGWW
FT                   LSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWIDNDKLKSYILKCQDNETGG
FT                   IADKPGDIPDVFHTFFGICGLSLMGYFKDQIESIDPVYALGTKTLQKLGLNLPWNKNL"
XX
SQ   Sequence 1020 BP; 373 A; 107 C; 180 G; 360 T; 0 other; 3129963277 CRC32;
     atgactgata atattaataa agaatcaacc acaacaacaa caacaattga tcatacaacc        60
     aatttattaa ttgataaaca tgtggaatat atagttaaat taggatcaaa gaaggattca       120
     tttgaatatt gggtaacaga acatattaga atgaatggaa tgtattgggg attatcatca       180
     ttatatttat taaaatcatt agataaatta gataaaaatg aagttataca atggttatta       240
     tcatgtcaaa aatcaaatgg tggattcggt ggtaacactt cccatgacga tcatttactt       300
     tcaactttat cagctgttca aattttaatt caatatgatg ctttagataa aatagatatt       360
     aattctgttg tagattatgt tgtaaaattg caaagagagg atggatcatt tgttggtgat       420
     caatggggtg aagttgatac aagattttca tatgctgcaa taatgtgcct ttctttatta       480
     aaaagtttag ataaaattaa ttgtgaaaaa gctgtagaat atatattaag ttgtcaaaat       540
     tttgatggtg gttttggttc cattccaggt gctgaatctc atgctggtca aatttttaca       600
     tgtgttggtg cattatcaat tttaaatgaa attaataaaa ttgatattga taaattagga       660
     tggtggttaa gtgaaagaca attaccaaat ggtggattaa atggtagacc agagaaatca       720
     tcagatgttt gttattcatg gtgggtatta tcagcattaa gtgcaattga tagattacat       780
     tggatcgata atgataaatt gaaaagttat attttaaaat gtcaagataa tgaaactggt       840
     ggtatagctg ataaacctgg tgatattcct gacgtttttc atacattttt tggtatatgc       900
     ggtttatcac taatgggtta tttcaaagat caaatcgaat caattgatcc agtttatgca       960
     cttggcacta aaactttaca aaaattaggt cttaatttac cttggaataa aaatttataa      1020
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