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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EDM04260; SV 1; linear; genomic DNA; ANN; ROD; 1647 BP.
XX
PA   CH473948.1
XX
DE   Rattus norvegicus (Norway rat) similar to N-acetylglucosaminyltrasnferase
DE   IVb (predicted), isoform CRA_b
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
OX   NCBI_TaxID=10116;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Rattus norvegicus"
FT                   /chromosome="10"
FT                   /strain="BN; Sprague-Dawley"
FT                   /mol_type="genomic DNA"
FT   CDS             join(CH473948.1:22195043..22195139,
FT                   CH473948.1:22200133..22200318,
FT                   CH473948.1:22200415..22200555,
FT                   CH473948.1:22200645..22200778,
FT                   CH473948.1:22201179..22201225,
FT                   CH473948.1:22201487..22201600,
FT                   CH473948.1:22201796..22201871,
FT                   CH473948.1:22202045..22202159,
FT                   CH473948.1:22202417..22202547,
FT                   CH473948.1:22202742..22202849,
FT                   CH473948.1:22202939..22203132,
FT                   CH473948.1:22203543..22203621,
FT                   CH473948.1:22203701..22203788,
FT                   CH473948.1:22203870..22203982,
FT                   CH473948.1:22204067..22204090)
FT                   /codon_start=1
FT                   /gene="RGD1562836_predicted"
FT                   /locus_tag="rCG_33476"
FT                   /product="similar to N-acetylglucosaminyltrasnferase IVb
FT                   (predicted), isoform CRA_b"
FT                   /note="gene_id=rCG33476.0 transcript_id=rCT33476.0
FT                   protein_id=rCP45581.0 isoform=CRA_b"
FT                   /db_xref="GOA:B2GV39"
FT                   /db_xref="InterPro:IPR006759"
FT                   /db_xref="UniProtKB/TrEMBL:B2GV39"
FT                   /protein_id="EDM04260.1"
FT                   /translation="MRLRNGTFLTLLLFCLCAFLSLSWYAALSGQKGDVVDIYQREFLA
FT                   LRDRLHAAEQESLKRSKELNLVLEEIKRAVSERQALRDGEGNRTWGRLTEDPRLKPWNV
FT                   SHRHVLHLPTVFHHLPHLLAKESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTL
FT                   HSLISELSPQEKEDSVIVVLIAETDTQYTSAVTENIKALFPTEIHSGLLEVISPSPHFY
FT                   PDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMK
FT                   NFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKV
FT                   CNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKHALRKEHVNP
FT                   PAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEH
FT                   PEDKLFNTSVEVLPFDNPQSEKEALQEGRSATLRYPRSPDGYLQIGSFYKGVAEGEVDP
FT                   AFGPLEALRLSIQTDSPVWVILSEIFLKKAD"
XX
SQ   Sequence 1647 BP; 365 A; 480 C; 453 G; 349 T; 0 other; 987645038 CRC32;
     atgaggctcc gcaatggcac cttcctgacg ctgctgctct tctgcttgtg cgccttcctc        60
     tctctctcct ggtacgcagc gctcagcggc cagaaaggtg acgtggtgga catttaccag       120
     cgcgagttcc tggcactgag agaccgtttg cacgcggctg agcaagagag cctgaagcgc       180
     tccaaggagc taaacctggt gctggaagaa atcaagaggg cagtgtccga gaggcaggcg       240
     ctgcgggacg gagaaggcaa tcgcacttgg ggccgcctaa cagaggatcc gcgactgaag       300
     ccgtggaacg tctcgcacag gcacgtactt catctgccca ccgtcttcca ccatctgccg       360
     cacctgctgg ctaaggaaag cagtctgcag cccgcagtgc gagtgggcca gggccgcacc       420
     ggagtgtccg tggtgatggg cattccgagc gtgcggcgcg aggtgcactc gtacttgact       480
     gacacattgc actcgctcat ctcggagctg agcccgcagg agaaggaaga ctcggtcatc       540
     gtggtgctga tcgccgagac tgatacacag tacacgtcgg cagtgacaga gaacatcaaa       600
     gccttgttcc ccacagagat ccattctggg ctcctggaag tcatctcccc ttcccctcac       660
     ttctatcctg acttctcccg ccttcgagag tcctttgggg atcccaagga gagagtcagg       720
     tggaggacca aacagaacct cgattactgc ttcctcatga tgtatgcaca gtccaaaggc       780
     atctactacg tgcagctgga ggatgacatt gtagccaagc ccaactactt gagcactatg       840
     aagaactttg ccctccagca gccctctgag gactggatga tcctggagtt ctcgcagctg       900
     ggcttcattg ggaagatgtt caagtcactg gatctgagcc tgattgtgga attcatcctt       960
     atgttctacc gagacaagcc catcgactgg ctcctggacc acatcctgtg ggtgaaagtc      1020
     tgcaaccctg agaaggatgc gaaacattgt gatcggcaga aggccaacct tcggatccgc      1080
     ttcaagccgt ccctcttcca gcacgtgggc actcactcat ccctggcggg caaaatccag      1140
     aaactgaagg ataaagactt tggaaagcat gctctacgga aggagcacgt gaacccaccg      1200
     gcggaggtga gcacaagcct gaagacgtac cagcatttca ccctggagaa ggcctacttg      1260
     cgagaggatt tcttctgggc cttcacacct gctgccggag acttcatccg gttccgcttc      1320
     ttccagccac tgcgcctcga gcggttcttt ttccgaagcg ggaacattga gcacccagaa      1380
     gataagctct tcaacacttc tgtggaggtg ctgcccttcg ataaccccca gtcagagaag      1440
     gaggcccttc aggagggccg ctcagccact ctccggtacc ctcggagccc tgatggctac      1500
     ctccagattg gctccttcta caagggtgta gctgaaggag aagtggatcc tgcctttggc      1560
     cccctggaag cactgcgtct ctccattcag actgactccc cggtgtgggt cattttgagt      1620
     gagatctttc tgaaaaaggc cgactaa                                          1647
//
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