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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAR11564; SV 1; linear; genomic DNA; STD; PRO; 1671 BP.
XX
PA   CU928163.2
XX
DE   Escherichia coli UMN026 choline dehydrogenase, a flavoprotein
XX
OS   Escherichia coli UMN026
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=585056;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1671
FT                   /organism="Escherichia coli UMN026"
FT                   /strain="UMN026"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CU928163.2:378712..380382)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="ECUMN_0349"
FT                   /product="choline dehydrogenase, a flavoprotein"
FT                   /function="5 : Central intermediary metabolism"
FT                   /function="15.10 : Adaptations to atypical conditions"
FT                   /EC_number="1.1.99.1"
FT                   /note="Evidence 1b : Function experimentally demonstrated
FT                   in the studied species; PubMedId : 20390040, 89124888,
FT                   92065800, 1879697; Product type e : enzyme"
FT                   /db_xref="GOA:B7N8L3"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:B7N8L3"
FT                   /inference="ab initio prediction:AMIGene:2.0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAR11564.1"
FT                   /translation="MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRT
FT                   QMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDL
FT                   DNWAQEPGLENWSYLDCLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIE
FT                   AGVQAGYPRTDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMT
FT                   DHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGSAELLAEF
FT                   DIPLVHDLPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGAS
FT                   NHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRI
FT                   KSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDE
FT                   QLDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLN
FT                   ATTIMIGEKMADMIRGKDALPRSTAGYYVANGRPVRAKK"
XX
SQ   Sequence 1671 BP; 372 A; 465 C; 502 G; 332 T; 0 other; 2998461116 CRC32;
     ttgcaatttg actacatcat tattggtgcc ggctcagccg gcaacgttct cgctacccgt        60
     ctgactgaag atccgaacac aaccgtgctg ctgcttgaag caggcggccc ggactatcgc       120
     tttgacttcc gcacccagat gcccgccgcg ctggcattcc cgctacaggg taaacgctat       180
     aactgggcct atgagacgga accggaaccg tttatgaaca accgtcgcat ggagtgcgga       240
     cgcggtaagg ggcttggcgg gtcatcactg atcaacggca tgtgttacat ccgtggtaac       300
     gcgctggatc tcgataactg ggcgcaagaa cccggtctgg agaactggag ttatctcgac       360
     tgcctgccct actaccgcaa ggccgagact cgcgatgtag gcgagaacga ctaccacggt       420
     ggcgatggcc cggtgagcgt cactacctcc aaacccggcg tcaatccgct gtttgaagcg       480
     atgattgaag cgggcgtgca ggcaggctac ccgcgcacgg acgatctcaa cggctatcag       540
     caggaaggtt ttggcccgat ggatcgcacc gtcacgccgc atggccgtcg cgccagcacc       600
     gcgcgtggct atctcgatca ggccaaatcg cgccctaacc tgaccattcg tactcacgcc       660
     atgaccgatc acatcatttt tgacggcaaa cgcgcggtgg gcgtcgagtg gctggaaggc       720
     gacagcacca ttccaacccg cgcgacagcg aataaagagg tgctgttatg tgcaggtgcg       780
     atcgcctctc cgcagatcct gcaacgttcc ggcgtgggta gcgctgaact gctggcggag       840
     tttgatattc cgctggtgca tgatttaccc ggcgtcggcg aaaatcttca ggatcacctg       900
     gagatgtacc tgcaatatga gtgcaaagaa ccggtttccc tctaccctgc cctgcagtgg       960
     tggaatcagc cgaaaatcgg tgcggagtgg ctgtttggcg gcaccggcgt tggtgccagc      1020
     aaccactttg aagcaggcgg atttattcgc agccgtgagg aatttgcgtg gccgaatatt      1080
     cagtaccatt tcctgccagt ggcgattaac tataacggct cgaacgcagt gaaagagcac      1140
     ggcttccagt gccacgtcgg atcgatgcgc tcgccaagcc gtgggcatgt gcggattaaa      1200
     tcccgcgacc cgcaccagca tccagcgatt ctgtttaact acatgtcgca cgagcaggac      1260
     tggcaggagt tccgcgacgc aattcgcatc acccgcgaga tcatgcatca accggcgctg      1320
     gatcagtatc gtggccgcga aatcagcccc ggtgtcgaat gccagacgga tgagcagctc      1380
     gatgagttcg tgcgtaacca cgccgaaacc gccttccacc cgtgcggtac ctgcaaaatg      1440
     ggttatgacg agatggcagt ggttgacggc gaaggccgcg tacacgggct ggaaggcctg      1500
     cgcgtggtgg atgcgtcaat tatgccgcag attatcaccg gcaatttgaa cgccacgact      1560
     attatgattg gcgagaaaat ggcggatatg attcgcggga aggatgcgtt gccgaggagc      1620
     acggcgggat attatgtggc aaatgggagg ccggtgagag cgaaaaaatg a               1671
//
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