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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAR01670; SV 1; linear; genomic DNA; STD; PRO; 1689 BP.
XX
PA   CU928161.2
XX
DE   Escherichia coli S88 choline dehydrogenase, a flavoprotein
XX
OS   Escherichia coli S88
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=585035;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1689
FT                   /organism="Escherichia coli S88"
FT                   /strain="S88"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CU928161.2:340892..342580)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="ECS88_0319"
FT                   /product="choline dehydrogenase, a flavoprotein"
FT                   /function="5 : Central intermediary metabolism"
FT                   /function="15.10 : Adaptations to atypical conditions"
FT                   /EC_number="1.1.99.1"
FT                   /note="Evidence 1b : Function experimentally demonstrated
FT                   in the studied species; PubMedId : 20390040, 89124888,
FT                   92065800, 1879697; Product type e : enzyme"
FT                   /db_xref="GOA:B7MCD0"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:B7MCD0"
FT                   /inference="ab initio prediction:AMIGene:2.0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAR01670.1"
FT                   /translation="MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRT
FT                   QMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDL
FT                   DNWAQEPGLENWSYLDCLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIE
FT                   AGVQAGYPRTDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMT
FT                   DHIFFDGKRAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEF
FT                   DIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGAS
FT                   NHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRI
FT                   KSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDE
FT                   QLDEFVRNHAETAFHPCGTCKMGYDEMAVVDAEGRVHGLEGLRVVDASIMPQIITGNLN
FT                   ATTIMIGEKMADMIRGKDALPRSTARYFVANGMPVRAKKMSRDVN"
XX
SQ   Sequence 1689 BP; 375 A; 471 C; 507 G; 336 T; 0 other; 3357914221 CRC32;
     ttgcaatttg actacatcat tattggtgcc ggctcagccg gcaacgttct cgctacccgt        60
     ctgactgaag atccgaacac aaccgtgctg ctgcttgaag caggcggccc ggactatcgc       120
     tttgacttcc gcacccagat gcccgccgcg ctggcgttcc cgctacaggg caaacgctac       180
     aactgggcct atgagacgga acccgaaccg tttatgaaca accgccgcat ggagtgcgga       240
     cgcggcaaag gtctgggcgg ttcatcgctg atcaacggta tgtgctacat ccgtggcaat       300
     gcgctggatc tcgataactg ggcacaagaa cctggtctgg agaactggag ttatctcgac       360
     tgcctgccct actatcgcaa ggccgagact cgcgatgtgg gcgagaacga ctaccacggc       420
     ggtgatggcc cggtgagcgt caccacctcc aaacccggcg tcaatccgct gtttgaagcg       480
     atgattgaag cgggcgtgca ggcgggctac ccgcgcacgg acgatctcaa cggctatcag       540
     caggaaggtt ttggcccgat ggatcgcacc gtcacgccgc atggccgtcg cgccagcacc       600
     gcgcgtggct atctcgatca ggccaaatcg cgccctaacc tgaccattcg tactcacgcc       660
     atgaccgatc acatcttttt tgacggcaaa cgcgcggtgg gcgtcgagtg gctggaaggc       720
     gacagcacca ttccgacccg cgcggcggcg aataaagaag tgctgttatg tgcaggcgcg       780
     attgcttcac cgcagatcct gcaacgctcc ggcgtcggca acgctgaact gctggcggag       840
     tttgatattc cgctggtgca tgaattacct ggcgtcggcg aaaatcttca ggatcacctg       900
     gagatgtatc tgcaatatga gtgcaaagaa ccggtttccc tctaccctgc cctgcagtgg       960
     tggaatcagc cgaaaatcgg tgcggagtgg ctgtttggcg gcaccggcgt tggtgccagc      1020
     aaccactttg aagcaggcgg atttattcgc agccgtgagg aatttgcgtg gccgaatatt      1080
     cagtaccatt tcctgccagt ggcgattaac tataacggct cgaacgcagt gaaagagcac      1140
     ggcttccagt gccacgtcgg atcgatgcgc tcgccaagcc gtgggcatgt gcggattaaa      1200
     tcccgcgacc cgcaccagca tccggcgatt ctgtttaact acatgtcgca cgagcaggac      1260
     tggcaggagt tccgcgacgc aattcgcatc acccgggaga tcatgcatca accggcgctg      1320
     gatcagtatc gtggccgcga aatcagcccc ggtgtcgaat gccagacgga tgagcagctc      1380
     gatgagttcg tgcgtaacca cgccgaaacc gccttccacc cgtgcggtac ctgcaaaatg      1440
     ggttatgacg agatggcagt ggttgacgcc gaaggccgcg tacacgggct ggaaggcctg      1500
     cgcgtggtgg atgcgtcaat tatgccgcag attatcaccg gcaatttgaa cgccacgacg      1560
     attatgattg gcgagaaaat ggcggatatg attcgcggga aggatgcgtt gccgaggagc      1620
     acggcaagat attttgtggc aaatgggatg ccggtgagag cgaaaaaaat gagtcgtgat      1680
     gtgaactga                                                              1689
//
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