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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ91038; SV 1; linear; genomic DNA; STD; PRO; 1323 BP.
XX
PA   CU928158.2
XX
DE   Escherichia fergusonii ATCC 35469 D-xylose isomerase
XX
OS   Escherichia fergusonii ATCC 35469
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=585054;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1323
FT                   /organism="Escherichia fergusonii ATCC 35469"
FT                   /strain="ATCC 35469T"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CU928158.2:3648910..3650232)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xylA"
FT                   /locus_tag="EFER_3566"
FT                   /product="D-xylose isomerase"
FT                   /function="6.11 : Sugars"
FT                   /EC_number="5.3.1.5"
FT                   /note="Evidence 1b : Function experimentally demonstrated
FT                   in the studied species; PubMedId : 6330500, 90138880,
FT                   2132127, 2405386, 6320721, 6325179, 6327696; Product type e
FT                   : enzyme"
FT                   /db_xref="GOA:B7LTH9"
FT                   /db_xref="InterPro:IPR018115"
FT                   /db_xref="UniProtKB/Swiss-Prot:B7LTH9"
FT                   /inference="ab initio prediction:AMIGene:2.0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ91038.1"
FT                   /translation="MQAYFDQLDRVRYEGPKTTNPLAFRHYNPDELVLGKRMEDHLRFA
FT                   ACYWHTFCWNGADMFGVGAFDRPWQQPGEALMLAKRKADVAFEFFHKLNVPFYCFHDVD
FT                   VSPEGASLKEYKNNFAEMVDVLAAKQEQSGVKLLWGTANCFTNPRYGAGAATNPDPEVF
FT                   SWAATQVVTAMEATKRLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHK
FT                   IGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHH
FT                   EIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDA
FT                   KVRRQSTDKYDLFYGHIGAMDTMALALKVAARMIEDGELDKRVAQRYSGWNSELGQQIL
FT                   KGQMSLSDLAKYAQDHNLSPVHQSGHQELLESLVNHYLFDK"
XX
SQ   Sequence 1323 BP; 346 A; 309 C; 361 G; 307 T; 0 other; 3359141710 CRC32;
     atgcaggctt attttgatca actcgaccgt gttcgttacg aaggcccgaa aaccactaac        60
     ccgttagcat tccgccatta caatcctgat gagctggtac tgggtaaacg tatggaagat       120
     cacttgcgtt ttgctgcctg ctactggcat accttctgct ggaacggtgc ggatatgttt       180
     ggtgttggcg cgtttgatcg cccatggcaa cagccgggtg aagcgctaat gctggcgaaa       240
     cgtaaagctg acgtagcctt tgaattcttc cacaaactga atgtaccgtt ctactgtttc       300
     catgatgttg acgtgtcacc agaaggcgca tcgctgaaag agtacaaaaa taacttcgct       360
     gaaatggttg atgtgctggc agcgaaacaa gaacaaagcg gtgtgaaact gctatggggt       420
     acagcgaact gctttactaa cccacgctac ggcgcagggg cggcaactaa cccggatcca       480
     gaagtcttta gttgggcggc aacacaagtg gttaccgcga tggaagcaac caaacgcttg       540
     ggtggtgaaa actatgtact gtggggtggt cgtgaaggtt atgaaaccct gctgaatacc       600
     gatctgcgtc aggagcgcga acaacttggg cgcttcatgc agatggttgt tgagcacaaa       660
     cacaaaattg gcttccaggg cacactgctg attgagccga aaccgcagga gccaaccaaa       720
     caccagtacg attacgatgc cgccacggta tatggcttcc tgaaacagtt tggtctggaa       780
     aaagagatca aactgaatat cgaagctaac catgcgacgc tggcaggtca ctctttccac       840
     cacgaaattg ccaccgccat cgcgctgggg ctgttcggct ctgttgatgc caaccgtggt       900
     gatgcgcaat tgggctggga taccgaccag ttcccgaaca gcgtggaaga gaatgcgctg       960
     gtgatgtatg aaatccttaa agcgggtggc tttaccaccg gtggtctgaa cttcgacgcc      1020
     aaagttcgtc gtcagagcac cgataaatac gatttgttct acggtcatat tggcgcaatg      1080
     gatactatgg cgctggcatt gaaagtggct gcccgtatga ttgaagacgg tgaactggac      1140
     aaacgtgtgg cgcagcgtta ctccggctgg aatagcgagc tgggtcagca aattctgaaa      1200
     ggccagatgt cactgagtga cctggcaaaa tatgcccagg accataatct gtctccggtc      1260
     catcagagcg gtcaccagga attactggaa agtctggtga atcattattt gttcgataaa      1320
     taa                                                                    1323
//
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