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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ80330; SV 1; linear; genomic DNA; STD; PRO; 1329 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 UDP-N-acetylmuramoylalanine--D-glutamate
DE   ligase
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1329
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             complement(FM178379.1:2863516..2864844)
FT                   /transl_table=11
FT                   /gene="murD"
FT                   /locus_tag="VSAL_I2646"
FT                   /old_locus_tag="TVS2665"
FT                   /product="UDP-N-acetylmuramoylalanine--D-glutamate ligase"
FT                   /EC_number="6.3.2.9"
FT                   /db_xref="GOA:B6ELH7"
FT                   /db_xref="InterPro:IPR005762"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6ELH7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ80330.1"
FT                   /translation="MTGFGGVKNVVVVGLGMTGLSVVKHLLRQPEALIVKVIDTRETPP
FT                   GQEQLPEQVELHSGSWQQDWLLDADLIVTNPGIALASSQLQPAIKKGTPVVGDIELFAW
FT                   AVTAPVIAITGSNGKSTVTDLTGEMANAAGVKTAVGGNIGFAALDLLEQDADLYVLELS
FT                   SFQLETTSSLKLKAAAFLNLSEDHMDRYQGMEDYRQAKLRVFDHADVCIVNRDDKETYP
FT                   DTADKTLISFGFDTSDEYGCIEENGRLFLAKNNTPIIAANELGLVGKHNIANSLVALAL
FT                   LDAAGVNTNKTLDTLKRYNGLTHRCQVVAEMNGVRWVNDSKATNVASTLAALSGLSIEG
FT                   KLHLLVGGVGKGADFSELSPALNELDLMMYCFGEDGVQFMPLDPRSRLCQTMDEAIELL
FT                   SPELTFGDMVMLSPACASFDQYTNFMARGDAFTALAKHYSTEK"
XX
SQ   Sequence 1329 BP; 371 A; 230 C; 313 G; 415 T; 0 other; 2378149915 CRC32;
     atgactggtt ttggtggtgt aaaaaacgtt gttgtggttg gcttaggaat gacagggtta        60
     tctgttgtta agcatttgct gagacaacca gaagcgttaa tagtcaaagt tattgatact       120
     cgtgaaacgc caccaggcca agaacaattg cctgaacagg ttgagttaca ttctggtagt       180
     tggcaacaag attggctgtt agacgccgat cttattgtta ctaacccagg tattgcgctt       240
     gcttcttctc aattacaacc agccattaaa aagggcacgc cagttgttgg tgatattgaa       300
     ttgtttgcgt gggcagtgac ggcccctgtg attgcaatta ccggctctaa tggcaaaagt       360
     acggtcaccg atttaaccgg tgaaatggcc aatgctgcag gggttaaaac cgctgtcggt       420
     ggtaatatcg gctttgctgc gttagatcta ttagaacaag atgccgatct ttatgtactg       480
     gaactatcca gttttcaact cgaaactaca tcatcattaa agctaaaagc cgccgcattt       540
     ttgaatctat ctgaagacca tatggataga taccaaggta tggaagatta tcgtcaagct       600
     aagttgcgtg tatttgatca tgccgatgtt tgtattgtta atcgtgatga taaagaaact       660
     tacccagata cagcagataa aacgttaatt agttttgggt ttgataccag tgatgagtac       720
     ggttgcattg aagaaaatgg tcggctgttt ttagctaaaa ataacacacc tattattgct       780
     gccaatgagc ttggtcttgt tggtaaacac aatattgcta acagccttgt tgctcttgct       840
     ttacttgatg ctgcaggtgt taataccaat aaaacattag atacgttgaa gcgttacaat       900
     ggattaacgc atcgctgcca agttgtcgct gaaatgaatg gtgttcgatg ggttaacgat       960
     tctaaagcaa ctaatgtggc gagtacactg gctgcacttt ctggtcttag tattgaaggg      1020
     aaacttcatt tgttggttgg tggtgttggt aaaggggctg atttttcgga attatcgcca      1080
     gcattgaacg aattggattt aatgatgtat tgttttggcg aggatggcgt gcaatttatg      1140
     cctttagatc ctcggtctcg attatgccaa acaatggatg aggcgattga gttattatcc      1200
     cctgaattaa catttggaga tatggtaatg ctttctcctg catgtgccag ttttgatcaa      1260
     tatactaact ttatggcaag aggcgatgca tttacagcat tagctaaaca ctattcaact      1320
     gagaaataa                                                              1329
//
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