spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ80327; SV 1; linear; genomic DNA; STD; PRO; 1464 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 UDP-N-acetylmuramate--L-alanine ligase
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1464
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             complement(FM178379.1:2859781..2861244)
FT                   /transl_table=11
FT                   /gene="murC"
FT                   /locus_tag="VSAL_I2643"
FT                   /old_locus_tag="TVS2662"
FT                   /product="UDP-N-acetylmuramate--L-alanine ligase"
FT                   /EC_number="6.3.2.8"
FT                   /db_xref="GOA:B6ELH4"
FT                   /db_xref="InterPro:IPR005758"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6ELH4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ80327.1"
FT                   /translation="MTTEQKLQLAEIRTMIPEMRRVECIHFVGIGGAGMSGIAEVLLNE
FT                   GYHISGSDVAENSVTVRLAEKGADIFFGHHASNVEKASVVVVSTAIDQANPEIVAAKEN
FT                   RIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTALTTQIYSEAGLDPTFVNGGLVKNAG
FT                   TNARLGSSRFLIAEADESDASFLHLQPMVSIVTNIEADHMDTYGGDFEVLKQTFIDFLH
FT                   NLPFYGQAVMCIDDDVVRELLPRVSRQVITYGFSDDADVRLINYRQEGQKSFFTVQRKD
FT                   RTDLDIVLNIPGKHNALNATAAIAVATEEDVEDSAILSALLNFEGAGRRFDQLGEFETG
FT                   NGHAMLVDDYGHHPTEVDVTIKAARAGWEDKRLVMIFQPHRYSRTRDLYDDFANVLDNV
FT                   DVLIMLDVYSAGEKPIAGADGRALCRTIRARGKLDPIFVPTIDALPSVLANIIQNNDLV
FT                   LTQGAGDVGKLAKQLASLELNIQAMKELG"
XX
SQ   Sequence 1464 BP; 422 A; 247 C; 349 G; 446 T; 0 other; 724599589 CRC32;
     atgacaacag aacagaaact acaattagct gaaattagaa cgatgatccc tgaaatgcgc        60
     cgtgttgaat gcatccactt tgttggaatt ggcggtgcgg gtatgagtgg gattgcggaa       120
     gttttattaa atgagggcta ccatattagt ggctctgatg ttgcagaaaa tagtgtcact       180
     gttcgtttag ctgaaaaggg tgctgatata ttttttgggc atcacgcaag taatgtagaa       240
     aaagcgagtg tggtggttgt atcaacggcg atagatcaag ctaaccctga aatcgtagca       300
     gcaaaagaaa atcgtatccc tgtgatacgt cgcgctgaaa tgcttgctga attaatgcgt       360
     tatagacatg ggatcgcggt tgcggggact catggtaaaa caacaacaac ggcattaacc       420
     actcaaattt attcagaagc aggtttagat cctacttttg ttaatggcgg cttggttaag       480
     aatgctggaa cgaatgcccg tttaggttca agtcgttttc ttattgctga agccgatgaa       540
     agtgatgcct catttttaca cttgcagcca atggtaagta ttgtcactaa cattgaagcc       600
     gatcatatgg atacttatgg cggtgacttt gaagtgttaa aacaaacttt tattgatttt       660
     cttcataacc tgccatttta tggtcaagct gtcatgtgta ttgatgatga tgtggtaaga       720
     gagttattac cgcgcgttag tcgccaagtt attacgtacg gtttttccga tgatgcggat       780
     gtacgtttaa ttaattatcg tcaagaaggt caaaaaagct ttttcacggt acaaagaaaa       840
     gatcgtacag atttagatat tgtccttaat attccgggta aacataatgc attgaatgca       900
     acagcagcca ttgctgttgc tactgaagaa gacgttgaag atagcgcgat tctttccgca       960
     ttactcaatt ttgaaggtgc tgggcgtcga tttgatcagt taggtgagtt tgaaacgggc      1020
     aatggacacg cgatgcttgt cgatgattac ggtcatcacc ctacagaagt cgatgttacg      1080
     attaaagcgg cacgtgcagg ctgggaagat aaacgtttag ttatgatatt ccaacctcac      1140
     cgttatagcc gaacgcgtga tttgtatgat gattttgcta acgttttaga taatgttgat      1200
     gtacttatta tgcttgatgt ttattcagcg ggtgaaaaac ccattgcagg tgctgatggc      1260
     cgagcgttgt gtcgtacgat tcgagctcgt ggtaaattag atccaatatt tgttccaact      1320
     attgatgcat taccctctgt tttggctaac atcattcaaa ataatgattt agtgctgaca      1380
     caaggggctg gtgatgttgg taaattagca aaacaactcg cttcattgga attaaatatc      1440
     caagcaatga aagagttagg ttaa                                             1464
//
spacer
spacer