spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ80063; SV 1; linear; genomic DNA; STD; PRO; 882 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 dihydrodipicolinate synthase
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..882
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             complement(FM178379.1:2549488..2550369)
FT                   /transl_table=11
FT                   /gene="dapA"
FT                   /locus_tag="VSAL_I2379"
FT                   /old_locus_tag="TVS2381"
FT                   /product="dihydrodipicolinate synthase"
FT                   /EC_number="4.2.1.52"
FT                   /db_xref="GOA:B6EJT2"
FT                   /db_xref="InterPro:IPR002220"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EJT2"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ80063.1"
FT                   /translation="MFSGSIVALVTPLDTDGEVDYTSLKNLVDYHINAGTDGIVAVGTT
FT                   GESATLSVEEHVKLVMKTLEFSDGRIPVIAGTGANATHEAVTFSKLFRDSGVAGCLSVT
FT                   PYYNKPTQEGLFLHYKAISESTDVPQILYNVPGRTAVDLLPETVARLAEFDNIVALKDA
FT                   TAELDRIAITRELCGDKFIQLSGDDATALEFVKMGGHGVISVTANVAAKDMATMFALAA
FT                   QGKFEEAEIINQRLMPLHQDLFVEANPMPVKWATHRLGMITHPDIRLPLTELSHSAQPV
FT                   VEQALIRAGVLK"
XX
SQ   Sequence 882 BP; 258 A; 158 C; 201 G; 265 T; 0 other; 1317193957 CRC32;
     atgttctcag gtagcattgt cgccttagtg acaccattgg acaccgatgg tgaagttgat        60
     tacacaagtt taaaaaatct cgttgattat catattaatg caggtacaga tggcattgtt       120
     gctgttggca ctactggtga gtcagcgaca ttaagtgtag aagaacatgt caagttagtg       180
     atgaaaacgc ttgagttttc tgatggcaga attcctgtta ttgccggtac tggcgcaaac       240
     gcgactcatg aagcggtaac gttcagtaaa ttatttcgag attcaggtgt tgctggctgt       300
     ttaagcgtaa cgccttatta taataagcca acacaagaag gtttattctt acattataaa       360
     gcgatttctg aatccacgga tgtacctcaa atcctttaca atgttccggg tcgcacggcc       420
     gtagatttat tgccagaaac ggtagctcgt ttagctgaat ttgataatat tgtcgcttta       480
     aaagatgcga cagcagaatt agaccgaatt gcaattacgc gtgaactttg tggtgataaa       540
     tttatccaac taagtggtga tgacgcaacg gcacttgaat ttgttaaaat gggcggtcat       600
     ggtgttattt ctgtaacggc aaacgtagca gcaaaagaca tggcaaccat gtttgcatta       660
     gcggctcaag gtaagtttga agaagcggaa attattaatc aacgcttaat gccattacat       720
     caggatttgt ttgttgaagc gaatccaatg cctgttaaat gggccactca tcgtttaggg       780
     atgattactc accctgatat tcgtttacca ctaacagaat taagtcattc agcacaacca       840
     gttgttgaac aagcattaat tcgtgctggt gtgttgaagt ag                          882
//
spacer
spacer