 |
|
EBI DbfetchID CAQ79571; SV 1; linear; genomic DNA; STD; PRO; 1776 BP. XX PA FM178379.1 XX DE Aliivibrio salmonicida LFI1238 aspartyl-tRNA synthetase XX OS Aliivibrio salmonicida LFI1238 OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; OC Aliivibrio. OX NCBI_TaxID=316275; XX FH Key Location/Qualifiers FH FT source 1..1776 FT /organism="Aliivibrio salmonicida LFI1238" FT /chromosome="1" FT /strain="LFI1238" FT /mol_type="genomic DNA" FT /country="Norway:Hammerfest" FT /isolation_source="Atlantic cod" FT CDS FM178379.1:2021027..2022802 FT /transl_table=11 FT /gene="aspS" FT /locus_tag="VSAL_I1886" FT /old_locus_tag="TVS1851" FT /product="aspartyl-tRNA synthetase" FT /EC_number="6.1.1.12" FT /db_xref="GOA:B6EGJ1" FT /db_xref="InterPro:IPR018153" FT /db_xref="UniProtKB/Swiss-Prot:B6EGJ1" FT /func_characterised="identical sequence" FT /protein_id="CAQ79571.1" FT /translation="MRSHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVV FT QVVVDPDMKDIFSTANQLRNEFCIKFTGEVRVRPDSQVNKDMSTGEVELYATGLEIINR FT SEALPLDFNQTNSEEQRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETP FT VLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLR FT ADRQPEFTQIDIETSFLSSNQVRDITERLVHDMWKELLDVELGQFPIMKFSEAIRRFGS FT DKPDLRNPLELVDIADLLKDVEFQVFAGPANDEKGRVAVIRVPGGASLSRKQIDEYGKF FT VGIYGAKGLAWMKVNDRAAGLEGVQSPVAKFLNADVVNGILERTEAESGDIILFGADKA FT NIVSEAMGALRIKLGDDLELTDKKAWAPLWVIDFPMFEEDGEGNLHAMHHPFTSPLGMT FT AEELKVNPAAANSDAYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFL FT LEALKYGTPPHAGLAFGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTNAPSPANPDSL FT AELAIAVKFAEKKDA" XX SQ Sequence 1776 BP; 501 A; 369 C; 392 G; 514 T; 0 other; 3239624230 CRC32; atgcgcagcc attactgtgg taacttgaac aagtcccttg caggacaaac tgtagaactt 60 tgcggctggg taaaccgtcg ccgtgattta ggcggtctta tcttcattga tatgcgagat 120 cgtgaaggtg tcgttcaggt agttgttgac ccagatatga aagatatctt ttcaactgct 180 aaccaactgc gcaatgaatt ctgtattaaa tttactggcg aagtacgtgt tcgtcctgac 240 agccaagtaa ataaagatat gtctacgggt gaagttgaac tttacgcgac aggtcttgag 300 atcatcaacc gttctgaagc acttccattg gatttcaatc aaacgaactc agaagagcaa 360 cgcctgaagt accgttatat tgatttacgt cgtccagaaa tgagtgaccg tatcaagtta 420 cgtgctcgtg catctagctt tgttcgtcgt ttcttagatg agaacctatt cttagatatc 480 gaaacaccag tactaacaaa agcaacgcca gaaggcgctc gtgattacct agtaccaagc 540 cgtgttcata aaggcagctt ctacgcactt ccacaatcac cacagttgtt taagcaactt 600 ctgatgatgt ctggttttga ccgttactac caaatcgtta aatgtttccg tgatgaagat 660 ttacgcgctg accgccaacc tgaatttact caaatagata tcgaaacctc tttcctttcg 720 tctaaccaag ttcgtgatat tactgaacgt ttggttcatg acatgtggaa agaacttctt 780 gatgttgagc ttggtcaatt tccaataatg aaattctctg aagcgattcg tcgttttggt 840 tctgataagc cagatctacg taacccacta gaattagtgg acattgcaga tcttcttaaa 900 gacgtagaat tccaagtatt cgctggtcct gcaaatgacg aaaaaggccg tgtagcggtt 960 attcgtgttc ctggtggcgc atcgctttct cgtaagcaaa ttgatgaata cggcaaattt 1020 gttggtattt acggcgcgaa aggccttgct tggatgaaag taaacgatcg tgctgctggt 1080 cttgaaggag ttcaatctcc tgttgctaaa ttcctaaacg cagacgttgt aaatggtatt 1140 ttagaacgca cagaagctga aagtggcgat atcatcctat ttggtgcaga taaagcaaac 1200 attgtttctg aagccatggg tgcattacgt atcaagcttg gtgatgactt agaactaaca 1260 gacaaaaaag catgggcacc tctttgggtt attgatttcc caatgtttga agaagatggc 1320 gaaggtaact tgcatgcaat gcaccaccca tttacttctc cattaggcat gacagcggaa 1380 gagcttaaag taaaccctgc tgctgcaaac tctgatgctt acgatatggt tatcaacggc 1440 tatgaagttg gtggtggctc tgtacgtatt cacaatgctg aaatgcaaac tgcagtattc 1500 ggtatcctag gtattgaagc gaaagagcaa caagagaaat ttggtttctt acttgaagcg 1560 cttaaatacg gtacgccgcc acacgcaggt cttgctttcg gtcttgaccg tcttgcaatg 1620 ctactttgcg gtactgaaaa cattcgtgac gttattgcat tccctaaaac aacggctgca 1680 gcatgtttac ttacgaatgc tccaagccct gcgaatccag attctcttgc agaattagcg 1740 attgcagtaa aatttgctga gaaaaaagac gcttaa 1776 // |
|