EBI Dbfetch

ID   CAQ79529; SV 1; linear; genomic DNA; STD; PRO; 1308 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 seryl-tRNA synthetase
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1308
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             FM178379.1:1979589..1980896
FT                   /transl_table=11
FT                   /gene="serS"
FT                   /locus_tag="VSAL_I1844"
FT                   /old_locus_tag="TVS1809"
FT                   /product="seryl-tRNA synthetase"
FT                   /EC_number="6.1.1.11"
FT                   /db_xref="GOA:B6ENN5"
FT                   /db_xref="InterPro:IPR015866"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6ENN5"
FT                   /experiment="The expressed protein is found to be
FT                   associated with the outer membrane in Aliivibrio
FT                   salmonicida"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ79529.1"
FT                   /translation="MLDSKLLRTELDETAEKLARRGFKLDVETLRTLEEQRKSLQVITE
FT                   DLQAQRNSRSKSIGQAKAKGDHEEADRIMADVATLGSELDDAKAGLAELQQQIESIALS
FT                   VPNLPDESVPYGKDEDENVEVLRWGTPLTYDFEVRDHVALGELADGLDFASAVKISGSR
FT                   FIVMKGQFARLHRALSQFMLDLHTEEHGYMEMYVPYLVNHDSLYGTGQLPKFGEDLFHT
FT                   SPLTEQVSDVPLKMLSLIPTAEVPVTNMVRDTITEEADLPLKMTAHTPCFRSEAGSYGR
FT                   DTRGLIRMHQFDKVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGF
FT                   GSRKTYDLEVWVPAQETYREISSCSNMWDFQARRMQARFRRQGEKKPELVHTLNGSGLA
FT                   VGRTMVAILENFQQADGKIAIPEVLRKYMNGVEFIG"
XX
SQ   Sequence 1308 BP; 382 A; 266 C; 299 G; 361 T; 0 other; 266950939 CRC32;
     atgcttgatt caaaattact tcgtacagag ctggatgaaa cagcagagaa actggcacgt        60
     cgtggcttta agctagacgt agagacactt cgcacccttg aagaacaacg taaatctctt       120
     caagttatca cggaagatct tcaagcgcag cgtaattccc gttcgaagtc cattggtcaa       180
     gcaaaagcga agggcgatca tgaagaagca gatcgcatca tggctgatgt tgcaacatta       240
     ggttcagaac tagatgatgc aaaagcagga cttgctgagc ttcaacaaca aattgaaagc       300
     atcgctttgt cagtaccaaa ccttcctgat gagtcagtac catatggtaa agatgaagat       360
     gaaaacgtag aagtattacg ttggggtaca ccgctaacgt acgattttga agtgagagat       420
     cacgttgctc ttggtgagct tgcggatggt cttgatttcg caagtgcagt taaaatctca       480
     ggctctcgtt tcatcgttat gaaaggtcag tttgcgcgtt tacaccgtgc tttatcgcaa       540
     tttatgcttg atcttcatac tgaagagcac ggttacatgg aaatgtatgt accttactta       600
     gttaaccacg acagcctata tggtactggt caactgccta agtttggtga agacttattc       660
     catacaagtc cgctaacaga gcaagtaagt gatgttcctc ttaagatgct atctcttatc       720
     cctacagcgg aagtgccagt aacaaacatg gtacgtgaca cgattactga agaagctgat       780
     cttccactga aaatgacggc acatacaccg tgtttccgtt ctgaagcagg atcttacggt       840
     cgtgatactc gtggtcttat tcgtatgcac caattcgaca aagttgaatt agttcaaatc       900
     acgaaaccag aagattcaat ggctgctctt gaagaactaa caggtcatgc tgagaaagta       960
     cttcaactgc ttgaacttcc ttaccgtaaa gtgattcttt gtactggtga tatgggcttc      1020
     ggttctcgta aaacatacga cttagaagta tgggttccag cacaagaaac gtaccgtgag      1080
     atttcttctt gttcaaacat gtgggatttc caagcgcgtc gtatgcaagc gcgtttccgt      1140
     cgtcaaggtg agaagaaacc agaattggtt catacactaa acggttctgg tcttgctgta      1200
     ggtcgtacaa tggttgcgat tctagagaac ttccaacaag ctgatggcaa aattgcaatt      1260
     cctgaagtac tgcgtaagta catgaatggt gttgagttca tcggttaa                   1308
//