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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ78479; SV 1; linear; genomic DNA; STD; PRO; 855 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 2-dehydro-3-deoxyphosphooctonate aldolase
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..855
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             FM178379.1:879657..880511
FT                   /transl_table=11
FT                   /gene="kdsA"
FT                   /locus_tag="VSAL_I0794"
FT                   /old_locus_tag="TVS0650"
FT                   /product="2-dehydro-3-deoxyphosphooctonate aldolase"
FT                   /EC_number="2.5.1.55"
FT                   /db_xref="GOA:B6EHH9"
FT                   /db_xref="InterPro:IPR006269"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EHH9"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ78479.1"
FT                   /translation="MQNQKTVKIGNIDVANDKPFTLFAGMNVLESRDLAMRMCETYVEI
FT                   TDRLGIPYVFKASFDKANRSSVHSYRGPGMEEGLKIFQELKDTFGVKIITDIHTEAQAQ
FT                   PVADVVDVIQLPAFLARQTDLVETMARTGAVINVKKPQFMSPDQVGNIVDKFAECGNEN
FT                   IILCERGSCMGYDNLVVDMLGFGVMKKVSNGSPIIFDVTHSLQNRDPSGKASGGRRSQT
FT                   VELAKAGLATGIAGLFIEAHPTPDKALCDGPSALPLDQLEPFLKQMKALDDLIKGFEHI
FT                   DIK"
XX
SQ   Sequence 855 BP; 255 A; 149 C; 193 G; 258 T; 0 other; 794835460 CRC32;
     atgcaaaatc aaaaaacagt aaaaattggc aatatcgatg tagcaaatga taagccgttt        60
     accttatttg caggtatgaa tgtattagag tctcgtgatt tggctatgcg catgtgtgag       120
     acttacgtag agatcactga tcgattaggc atcccatacg tatttaaagc gtcttttgat       180
     aaagcaaacc gttcgtcagt tcattcgtac cgtggtcctg gtatggaaga aggtctaaag       240
     atttttcaag aattgaaaga tacgtttggt gtgaaaatca ttacggatat tcatacagag       300
     gcacaagctc aacctgttgc tgatgtggtg gacgttattc aacttcctgc tttccttgct       360
     cgtcaaactg atttagttga gacaatggct agaacgggtg ctgtcattaa cgtgaaaaaa       420
     ccacaattca tgagccctga tcaagtcggc aatattgttg ataagtttgc tgagtgtggt       480
     aatgaaaata tcattctttg tgagcgtggt tcatgcatgg gttatgacaa cctagtggtt       540
     gacatgcttg gctttggtgt gatgaaaaaa gtatcaaatg gcagcccaat catttttgat       600
     gtgacgcatt ctttacagaa tcgcgatcca agtggtaaag catctggtgg tcgtcgttca       660
     caaacggttg aacttgctaa agcaggttta gcgacgggta ttgctgggtt atttattgaa       720
     gctcacccaa cgccagataa agcactgtgt gacggtcctt ctgcattacc attagatcaa       780
     ctagaacctt tcttaaaaca aatgaaagcg ttagatgact taattaaagg ctttgagcac       840
     atcgatatta aataa                                                        855
//
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