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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ78470; SV 1; linear; genomic DNA; STD; PRO; 591 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 peptidyl-tRNA hydrolase
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..591
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             complement(FM178379.1:871768..872358)
FT                   /transl_table=11
FT                   /gene="pth"
FT                   /locus_tag="VSAL_I0785"
FT                   /old_locus_tag="TVS0641"
FT                   /product="peptidyl-tRNA hydrolase"
FT                   /EC_number="3.1.1.29"
FT                   /db_xref="GOA:B6EHH0"
FT                   /db_xref="InterPro:IPR018171"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EHH0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ78470.1"
FT                   /translation="MSNQIKLLVGLANPGLEYKRTRHNAGAWVVEELARIHNIPMREEA
FT                   KFFGLTGRIQTNGQDLRLLIPTTFMNLSGKAIASIAKFYQIKPEEILVAHDELDLPPGV
FT                   AKFKKGGGHGGHNGLRDTISKLANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKEQEL
FT                   IDAAVDESTRCLDILLKDGLSKAQNRLHTFKAE"
XX
SQ   Sequence 591 BP; 188 A; 116 C; 125 G; 162 T; 0 other; 1470322967 CRC32;
     ttgagtaatc agatcaaact tcttgttgga ctagcaaacc ccggccttga gtacaaaaga        60
     actcgccata atgctggggc atgggtagtt gaagaactcg ctcgcattca taacattcca       120
     atgcgtgaag aagctaagtt ttttggatta acaggtcgaa ttcaaaccaa tggtcaggat       180
     cttcgattac taatccctac aacatttatg aacttatcag gaaaagccat tgcttcgatt       240
     gctaagtttt accaaataaa accagaagag atcctcgtcg ctcatgatga attagatctt       300
     cctcctggtg ttgctaaatt taaaaaaggt ggcgggcatg gtggccataa tggtcttcgt       360
     gacaccatta gtaaattagc gaatacgaaa gagttttatc gccttcgtat tggcattggc       420
     catcctggcc ataaagacaa agttgccggt tttgtattag ggaaagcgcc gactaaagag       480
     caagagttga tcgatgcagc agtagatgaa tctactcgtt gcttagatat cttacttaaa       540
     gacggactaa gtaaagcaca aaatcgttta cacacattca aagctgaata a                591
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