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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ78423; SV 1; linear; genomic DNA; STD; PRO; 1554 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 GMP synthase [glutamine-hydrolyzing]
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1554
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             FM178379.1:823131..824684
FT                   /transl_table=11
FT                   /gene="guaA"
FT                   /locus_tag="VSAL_I0738"
FT                   /old_locus_tag="TVS0582"
FT                   /product="GMP synthase [glutamine-hydrolyzing]"
FT                   /EC_number="6.3.5.2"
FT                   /note="The CDS appears to have a deletion of 8 amino acid
FT                   residues after codon 129 in comparison to the E.coli
FT                   orthologue"
FT                   /db_xref="GOA:B6EGZ6"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EGZ6"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ78423.1"
FT                   /translation="MTTNIHAQRILILDFGSQYTQLVARRIREIGVYCELWSWDVEESD
FT                   IRDFNPDGIILSGGPESVTEANSPRAPQYVFDSGVPVFGVCYGMQTMAEQLGGKVATST
FT                   EREFGYAAVQVTGESALFKDLEATQDVWMSHGDKVVEIPSDFVKIAETETCPYAAMANE
FT                   EKKYYGVQFHPEVTHTKNGLKMLENFVLNVCGCEGLWTSASIIEDAIARIKEQVGDDEV
FT                   ILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNEAEQVMEMFSEGFGLKIIHVE
FT                   AEERFLSALSGESDPEAKRKIIGHVFVDIFDEESKKLSNAKWLAQGTIYPDVIESAASK
FT                   TGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGLPYNMLYRHPFPGPG
FT                   LGVRVLGEVKKEYCDLLRRADAIFIEELHNADLYNKVSQAFTVFLPVRSVGVMGDGRKY
FT                   DWVVSLRAVETIDFMTAHWAHLPYDFLGKVSNRIINEVGGISRVVYDISGKPPATIEWE
FT                   "
XX
SQ   Sequence 1554 BP; 421 A; 276 C; 373 G; 484 T; 0 other; 2081201133 CRC32;
     atgacgacta atatccacgc tcaacgcatt cttattttag attttggttc tcaatacacg        60
     cagcttgttg cgcgtcgtat ccgtgagatt ggtgtttact gtgagctttg gagctgggat       120
     gtagaagaat cggatatccg tgacttcaat cctgatggca tcatcttatc tggtggtcca       180
     gaaagtgtga cagaagcaaa ttctccacga gctcctcaat atgtatttga ttctggtgtt       240
     cctgtattcg gcgtatgtta cggcatgcaa acaatggcag agcagcttgg cggtaaagta       300
     gcaacgtcta ctgaacgtga gtttggctat gccgcagttc aagtaactgg cgaatcagcg       360
     ttgtttaaag atcttgaagc aactcaagat gtttggatga gccacggtga taaagttgtt       420
     gagatcccat ctgatttcgt aaaaattgca gagacagaaa cgtgtcctta cgctgcaatg       480
     gcaaacgaag agaagaaata ctatggtgtt caattccacc cagaagtaac acacactaaa       540
     aatggtctaa aaatgcttga gaactttgtt cttaacgtat gtggttgtga aggtctgtgg       600
     acttctgcat caatcattga agatgccatt gctcgcatta aagaacaagt gggtgacgat       660
     gaagttattc ttggtctttc tggtggtgtt gattcatctg tggttgcgat gcttgctcac       720
     cgtgcgattg gcgataaact aacgtgtgta tttgttgata acggtttact tcgtttaaat       780
     gaagcagaac aagtaatgga aatgttcagt gaaggctttg gtcttaagat cattcatgtt       840
     gaagctgaag aacgtttctt aagcgctctt agtggtgaat cagatccaga agctaagcgt       900
     aagatcattg gtcatgtgtt tgttgatatt tttgacgaag agtctaagaa attatcaaat       960
     gctaagtggt tagctcaagg gaccatttat ccagatgtta ttgagtctgc ggcgtctaaa      1020
     acgggtaaag cacacgttat taaatctcac cataacgttg gcggcctacc tgatgacatg      1080
     gaaatgggtc ttgttgaacc gttacgtgaa ttgtttaaag atgaagttcg taagattggt      1140
     ctagaattag gtcttccata caacatgctt tatcgtcacc cgttccctgg gcccggtcta      1200
     ggtgtacgtg ttcttggtga agttaagaaa gagtactgtg atttacttcg tcgtgctgat      1260
     gcgatcttta ttgaagaact tcataatgct gatctttaca ataaagtatc tcaagcattc      1320
     acggtattct taccagtacg ctctgttggc gtaatgggtg atggccgtaa atacgactgg      1380
     gttgtctctc tacgtgcggt agaaaccatt gatttcatga cagcgcattg ggcacattta      1440
     ccatacgatt tcttaggtaa agtatctaac cgtattatta atgaagttgg tggtatttct      1500
     cgtgttgttt acgatatttc aggtaaacca ccagcgacga ttgagtggga ataa            1554
//
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