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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ77760; SV 1; linear; genomic DNA; STD; PRO; 510 BP.
XX
PA   FM178379.1
XX
DE   Aliivibrio salmonicida LFI1238 peptide deformylase (polypeptide
DE   deformylase)
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=316275;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..510
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="1"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT   CDS             complement(FM178379.1:78654..79163)
FT                   /transl_table=11
FT                   /gene="def"
FT                   /locus_tag="VSAL_I0075"
FT                   /old_locus_tag="TVS3204"
FT                   /product="peptide deformylase (polypeptide deformylase)"
FT                   /EC_number="3.5.1.88"
FT                   /db_xref="GOA:B6EP21"
FT                   /db_xref="InterPro:IPR000181"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EP21"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAQ77760.1"
FT                   /translation="MAVLEVLTFPDDRLRTVAKPVKTVTPEIQTFIDDMIETMYDEEGI
FT                   GLAATQVDFHQRIVVIDVSETRDEPMVLINPVITQKSGDDGIEEGCLSVPGAKGMVPRS
FT                   AEVSVTALDRDGNEFSFDADDLLAICVQHELDHLEGKLFVDYLSPLKRKRIKEKLEKIK
FT                   KFNEKN"
XX
SQ   Sequence 510 BP; 173 A; 95 C; 110 G; 132 T; 0 other; 2080860164 CRC32;
     atggccgtat tagaagtatt aacgttcccg gacgaccgtc tacgcaccgt agcaaaaccg        60
     gtaaaaacag taacacctga aatccaaaca ttcatcgatg atatgattga aaccatgtat       120
     gacgaagaag gcattggcct tgctgcaacg caagtcgatt tccatcaacg tatcgtggtt       180
     atcgatgtat cagagacacg cgatgaacca atggtattaa tcaatcctgt tattacacaa       240
     aaaagtggtg atgacggtat agaagaaggt tgtttatctg ttcctggcgc aaaaggaatg       300
     gttcctcgtt ctgctgaagt gtcagtaacg gcattggatc gtgatggaaa tgaatttagc       360
     tttgatgctg atgatttact agcaatctgc gtgcaacacg aattagatca ccttgaaggt       420
     aaattattcg ttgattactt gtcgccatta aagcgcaaac gcatcaaaga gaagctagaa       480
     aaaatcaaaa aattcaacga aaaaaattag                                        510
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