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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAQ14419; SV 1; linear; genomic DNA; STD; VRT; 1614 BP.
XX
PA   AL772133.30
XX
DE   Danio rerio (zebrafish) novel protein similar to vertebrate mannosyl
DE   (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme
DE   A (MGAT4A)
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1614
FT                   /organism="Danio rerio"
FT                   /chromosome="9"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="CHORI-211"
FT                   /clone="CH211-121J5"
FT   CDS             join(AL772133.30:61620..61710,AL772133.30:116923..117090,
FT                   AL772133.30:121873..122013,AL772133.30:139885..140018,
FT                   AL772133.30:147951..147997,AL772133.30:148102..148215,
FT                   AL772133.30:159282..159357,AL772133.30:164965..165079,
FT                   AL772133.30:165293..165423,AL772133.30:165639..165746,
FT                   AL772133.30:167078..167271,AL772133.30:173409..173539,
FT                   AL772133.30:177435..177598)
FT                   /locus_tag="CH211-121J5.1-001"
FT                   /standard_name="OTTDARP00000018780"
FT                   /product="novel protein similar to vertebrate mannosyl
FT                   (alpha-1,3-)-glycoprotein
FT                   beta-1,4-N-acetylglucosaminyltransferase, isozyme A
FT                   (MGAT4A)"
FT                   /note="match: proteins: Tr:Q4R854 Tr:Q53S97 Tr:Q5M854
FT                   Tr:Q80UI0 Tr:Q9UM21"
FT                   /db_xref="GOA:B0R014"
FT                   /db_xref="InterPro:IPR006759"
FT                   /db_xref="UniProtKB/TrEMBL:B0R014"
FT                   /protein_id="CAQ14419.1"
FT                   /translation="MRLRHGTVATAIVFFTSFLSLSWYTAWQNGKKLVAYQREFHALRE
FT                   RLRVAEHRTLQRSSELNAILEQFRRAISETNGSKDALSNFSDETQKLLKELAHRKPLQV
FT                   PNIYHHLPHLLNNEGSLHPAVQVGQGRTGVSMVMGIPTVKRKVKSYLSETLHSLIDKLS
FT                   AEEKLDCVIIVFVGETDVDYVNSVVAGLEKEFYTELNSGLLEVISPPASYYPDLSSLKE
FT                   TFGDSKERVKWRTKQNLDYSFLMMYAVNKGVYYVQLEDDIVAKPNYFATMKNFALQLAT
FT                   EDWMILEFSQLGFIGKMFQAPDLNLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAK
FT                   HCERQKSSLRIRFRPSLFQHVGLHSSLAGKIQKLTDKDFLKPLLHKIHVNPPAEVSTSL
FT                   KVYQGHTLEKTYMGEDFFWAITPMAGDYVLFKFDRPVHIDRFLFRSGNQEHPGDKIENT
FT                   TVEILPFSVTNKTPTPTTHSQLERDAQFENGVAEGTVEAVFNPVVAVRLSVQKDSAVWA
FT                   IISEVCLLFSGLELDGGVSE"
XX
SQ   Sequence 1614 BP; 414 A; 390 C; 416 G; 394 T; 0 other; 393353133 CRC32;
     atgaggctca gacatggaac tgttgccact gcgattgttt tcttcacatc gtttctcagt        60
     ctgtcctggt acacggcttg gcaaaatggc aaaaagttgg tagcgtatca gagggagttt       120
     catgccctgc gggagcgtct gcgggtggcg gagcaccgaa cactccagcg ctcctctgaa       180
     ctcaatgcca tcctggagca gttcagacga gccatctcag agaccaacgg cagcaaagat       240
     gccctctcca acttctcaga cgagactcag aagctgttga aggagttggc tcacaggaag       300
     ccccttcagg tgccaaatat ctaccaccac ctgcctcacc tgctcaacaa tgaaggcagt       360
     ctgcacccag ccgtacaggt gggacagggg cgaaccggag tttccatggt gatgggcatc       420
     cccacagtga agcggaaagt gaagtcatac ctgtcagaga cgcttcattc gctcatcgat       480
     aagctgtcgg cggaggagaa gctggattgc gtcatcatag tgtttgtagg agagacggac       540
     gtggattacg taaacagtgt ggttgcaggc cttgaaaaag agttctacac tgagctgaat       600
     tctgggttac tggaggtcat ttccccacct gccagctact atccggactt aagcagcttg       660
     aaagagacct tcggtgactc aaaggagagg gtgaaatgga ggaccaagca gaacttggac       720
     tattcttttc ttatgatgta tgctgtcaac aaaggggtct attatgtcca gttagaggac       780
     gacatcgttg ccaagcccaa ctattttgcc accatgaaaa actttgctct gcaacttgcc       840
     acagaggact ggatgatcct cgagttttca cagctgggct tcatcggtaa gatgttccaa       900
     gccccagatc taaatctcat cgtggagttt atcttcatgt tttataaaga gaagcccatc       960
     gattggctgc tggatcacat actctgggtc aaagtgtgca acccagagaa agatgccaaa      1020
     cactgtgaga gacagaagtc gagtctgcgc attcgtttca ggccctcttt gtttcagcac      1080
     gtaggcctgc actcctctct ggctgggaaa atacagaaac tcacggataa agatttcctg      1140
     aagcctctgc tgcacaagat tcatgtcaac ccgccggcgg aggtatccac gtctcttaaa      1200
     gtgtaccaag gccatacgct ggaaaaaacc tacatgggcg aggatttctt ctgggccatt      1260
     actccaatgg caggagacta tgtgctgttc aagtttgacc ggcccgtcca cattgacagg      1320
     ttcctttttc gcagtggaaa ccaggagcac ccaggagaca aaatcgagaa cactactgtc      1380
     gagatcctgc ccttttcggt aacaaataaa acaccaacac ctacaacaca ttctcaatta      1440
     gaaagagatg ctcagtttga gaatggagtg gctgagggga ctgtggaagc tgtttttaac      1500
     cctgtggtgg ctgttcgtct gtccgtccag aaagactctg ctgtctgggc cattattagc      1560
     gaggtctgtt tgctgttttc tgggcttgag ctggatggtg gtgtatcaga gtaa            1614
//
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