spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP39652; SV 1; linear; genomic DNA; WGS; INV; 1386 BP.
XX
PA   CAAC02000606.1
XX
DE   Caenorhabditis briggsae AF16 Hypothetical protein CBG23368
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1386
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="V"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc4470"
FT   CDS             join(CAAC02000606.1:599057..599350,
FT                   CAAC02000606.1:599394..599578,
FT                   CAAC02000606.1:599624..599719,
FT                   CAAC02000606.1:599763..599920,
FT                   CAAC02000606.1:599971..600079,
FT                   CAAC02000606.1:600128..600275,
FT                   CAAC02000606.1:600326..600383,
FT                   CAAC02000606.1:600712..601049)
FT                   /codon_start=1
FT                   /locus_tag="CBG23368"
FT                   /standard_name="CBG23368"
FT                   /product="Hypothetical protein CBG23368"
FT                   /note="contains similarity to Pfam domain PF01494 FAD
FT                   binding domain contains similarity to Interpro domains
FT                   IPR003042 (Aromatic-ring hydroxylase-like), IPR002938
FT                   (Monooxygenase, FAD-binding)"
FT                   /db_xref="GOA:A8Y432"
FT                   /db_xref="InterPro:IPR003042"
FT                   /db_xref="UniProtKB/Swiss-Prot:A8Y432"
FT                   /protein_id="CAP39652.1"
FT                   /translation="MPSVAIAGAGLVGALNACFFAQKGWDVSVYEFRKDIRTMKHVQGR
FT                   SINLALSQRGKSALEAVGLKEYIVNQGVPLYARLVHNKDGKTYSRQPYGKPGEHIVSIN
FT                   RRHLNEVMITQAEKSPNVKFFFEHKVKSVDYDKKQLVVQCTSQPSRIPTFGTKSPPAEH
FT                   EEFHVEADLIIACDGAYSAVRRSLMTIPRFDFSQEYIEHGYVELNIMANNNEFAFEENV
FT                   FHLWPRGHFTLIALANRDKTFTVTIFAPFTEFEKHMSTTEEVLSFFEENFPDAYLLLGK
FT                   EHIADTFNRVKPQSLVSIKCSPHSFFNNLVLMGDAAHAMVPFYGQGMNCGFEDCLVFSE
FT                   TLEEQNNDIASAVQVYSERRVNDAHTINDLAMYNYEELKDLVNKNSYKLRKKFDGFMNA
FT                   IFPKSWIPLYSMVTFTRIPYSEVVDRRRKQDRILSNLWKTTSTLALIGAAIGIYSNRGR
FT                   LGL"
XX
SQ   Sequence 1386 BP; 441 A; 287 C; 287 G; 371 T; 0 other; 2684788064 CRC32;
     atgccttcag ttgcgatagc tggagcaggt ctagtcggag cactcaacgc atgcttcttc        60
     gctcaaaaag gatgggatgt atcagtttac gaattccgta aagatatccg aaccatgaag       120
     catgttcaag gaagaagtat caacttggca ttgagtcaaa gagggaaatc agcccttgaa       180
     gctgttggac tcaaagaata cattgtgaat caaggagttc ctctctatgc aagacttgtg       240
     cacaataagg acggaaagac gtacagtagg caaccgtatg gtaaaccagg agagcacatt       300
     gtttcaatca accgtcgtca tctaaatgaa gttatgataa cccaagctga aaagtcacca       360
     aatgtcaaat tcttttttga acacaaagtt aaaagtgtag attatgacaa aaaacagttg       420
     gtagtccaat gtacatctca accatccagg ataccaactt ttggaaccaa atctccacca       480
     gcggaacacg aagagttcca tgtcgaagcc gatctcatca ttgcttgtga cggagcctac       540
     tctgcggttc gtagaagtct gatgactatt ccaagattcg acttctccca agaatacatc       600
     gagcatgggt acgtcgaatt gaatattatg gccaacaaca acgagttcgc ttttgaggaa       660
     aatgtgttcc atttgtggcc aagaggtcat ttcactctga ttgcattggc aaaccgggac       720
     aagactttca ccgtgactat attcgcgcct tttaccgaat ttgagaaaca tatgtcaact       780
     acagaagagg tgttatcttt ctttgaagag aactttccag acgcgtactt gcttcttgga       840
     aaagaacata tcgctgatac cttcaacaga gtgaaacctc aatcactcgt ttctatcaaa       900
     tgttcacctc attcattctt caacaatctg gttctgatgg gagatgctgc gcatgcaatg       960
     gttccatttt atggtcaggg aatgaattgc gggttcgaag attgtctcgt gttcagtgag      1020
     acacttgagg aacaaaacaa tgatattgca tcggctgttc aagtgtattc tgaaaggcgt      1080
     gtaaatgatg cacacaccat caacgatctt gccatgtaca attacgaaga gctgaaggat      1140
     cttgtcaaca aaaactccta caaactacga aaaaaattcg atggattcat gaacgcaatc      1200
     ttcccaaaaa gctggattcc tttatactca atggtgacat tcacacgtat tccttattca      1260
     gaagtggttg acagaagaag aaaacaagat agaattctat ccaatctatg gaaaaccaca      1320
     tccacattgg cactgattgg tgctgcaatt ggcatatatt caaatcgcgg tagacttgga      1380
     ttataa                                                                 1386
//
spacer
spacer