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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP37450; SV 3; linear; genomic DNA; WGS; INV; 573 BP.
XX
PA   CAAC02000571.1
XX
DE   Caenorhabditis briggsae AF16 C. briggsae CBR-CDO-1 protein
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..573
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="II"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc4181"
FT   CDS             complement(join(CAAC02000571.1:4579..4668,
FT                   CAAC02000571.1:5212..5315,CAAC02000571.1:5385..5536,
FT                   CAAC02000571.1:6032..6112,CAAC02000571.1:6523..6668))
FT                   /codon_start=1
FT                   /gene="Cbr-cdo-1"
FT                   /locus_tag="CBG20456"
FT                   /standard_name="CBG20456"
FT                   /product="C. briggsae CBR-CDO-1 protein"
FT                   /note="contains similarity to Pfam domain PF05995 Cysteine
FT                   dioxygenase type I contains similarity to Interpro domain
FT                   IPR010300 (Cysteine dioxygenase type I)"
FT                   /db_xref="GOA:Q60TI7"
FT                   /db_xref="InterPro:IPR010300"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q60TI7"
FT                   /protein_id="CAP37450.3"
FT                   /translation="MVSFVQLVVQIREIFEHKMVDVDEVMKLMGSYKSDINEWRRFAIF
FT                   DMNKYTRNLVDIGNGKYNLMILCWGPGMASSVHDHTDAHCFVKILDGELTETKYDWPKK
FT                   KHTPLETIENKTYGLNGVSYMNDELGLHRMENQSHSNGAVSLHLYIPPYSTCNAFDERT
FT                   GKKTKCTVTFYSKYGEKIDYHGSKEGK"
XX
SQ   Sequence 573 BP; 192 A; 101 C; 136 G; 144 T; 0 other; 3173348432 CRC32;
     atggtatcgt ttgtccaatt ggtcgttcaa attcgcgaaa ttttcgagca caaaatggtt        60
     gatgtggatg aggtgatgaa gttgatggga tcgtataaaa gtgatattaa cgagtggaga       120
     cgttttgcaa ttttcgacat gaacaaatac acccgaaatt tggtggacat tggaaatggc       180
     aagtacaact tgatgattct ctgctggggt cctggtatgg caagcagtgt ccacgaccat       240
     accgatgctc actgtttcgt gaaaattttg gatggcgaat tgacggaaac aaaatatgac       300
     tggccaaaaa aaaagcacac cccactggaa acaattgaaa ataaaacata tggattgaat       360
     ggggtgtctt atatgaatga cgagttgggt cttcaccgaa tggagaatca aagtcattcg       420
     aatggagccg tctcacttca cttgtacatt ccaccctaca gtacctgcaa cgcctttgat       480
     gagagaaccg gaaaaaagac caaatgcacg gtgacattct actcgaaata cggagaaaaa       540
     atcgattatc atggatcgaa agaagggaaa taa                                    573
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