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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP36564; SV 3; linear; genomic DNA; WGS; INV; 846 BP.
XX
PA   CAAC02000558.1
XX
DE   Caenorhabditis briggsae AF16 C. briggsae CBR-HAAO-1 protein
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..846
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="V"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc4126"
FT   CDS             join(CAAC02000558.1:1598264..1598507,
FT                   CAAC02000558.1:1599196..1599426,
FT                   CAAC02000558.1:1599473..1599587,
FT                   CAAC02000558.1:1599633..1599747,
FT                   CAAC02000558.1:1599800..1599885,
FT                   CAAC02000558.1:1599931..1599985)
FT                   /codon_start=1
FT                   /gene="Cbr-haao-1"
FT                   /locus_tag="CBG19288"
FT                   /standard_name="CBG19288"
FT                   /product="C. briggsae CBR-HAAO-1 protein"
FT                   /note="contains similarity to Pfam domain PF06052 3-
FT                   hydroxyanthranilic acid dioxygenase contains similarity to
FT                   Interpro domain IPR010329 (3-hydroxyanthranilic acid
FT                   dioxygenase)"
FT                   /db_xref="GOA:Q60W34"
FT                   /db_xref="InterPro:IPR016700"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q60W34"
FT                   /protein_id="CAP36564.3"
FT                   /translation="MAGVTAIEIPQWIQDNQGDFVPPVCNKCMFSDQLKVFYVGGPNQR
FT                   KDFHLEEGEEFFFQRKGDMVLKVIEKGQVRDLVIKQGEMFMLPARVEHSPQRFANSIGL
FT                   VVERERKNTEFDCVRFLVGSSNVTLFERWFFLTDVVKDLPPLIKEFYNSNEFKTGKPGK
FT                   GTFACNAPYEARWTDLPVPINRKEFIYDHISEVKNGPVKIYGAPEYKTEVMLLGEGSYD
FT                   LEAGAVELIIWLQENTFAVVEESGFTYALKSETMVRIKPNTKCLLNVKGGFAITIRMPG
FT                   "
XX
SQ   Sequence 846 BP; 248 A; 161 C; 217 G; 220 T; 0 other; 3376713585 CRC32;
     atggccggtg tcaccgcaat tgagattcca caatggattc aagataatca aggggatttt        60
     gtgccgcctg tctgtaacaa atgcatgttt tcggatcagc tgaaggtgtt ctatgtagga       120
     ggaccgaacc agagaaagga ttttcatttg gaggaaggag aagagttctt ctttcaaaga       180
     aaaggagata tggttctgaa agtgatcgag aaaggacagg ttcgggattt ggtcattaaa       240
     caaggtgaga tgttcatgct cccagctaga gtcgaacact ctccacagcg attcgccaac       300
     tccattgggc tggttgttga gcgtgaacga aagaacactg aattcgattg tgttcgattt       360
     cttgtcggct cctcaaatgt gacacttttt gaaagatggt tcttcttgac cgacgtcgtc       420
     aaggatcttc caccattgat taaggagttc tacaactcga atgaatttaa aactggtaaa       480
     cctggaaagg gaacatttgc atgcaatgct ccatacgagg cgagatggac tgatctgccc       540
     gttccaatca acagaaaaga gttcatttat gatcatatta gtgaagtcaa gaatggtccg       600
     gtgaaaatct acggggctcc agaatacaaa acggaagtca tgttgcttgg cgaggggtca       660
     tatgatttgg aagccggtgc tgtagagttg attatttggt tgcaggaaaa cactttcgca       720
     gttgtcgagg agagcgggtt cacctatgct ctcaagtcag agacaatggt ccggataaag       780
     ccaaacacca aatgccttct aaacgtcaag ggaggattcg caatcaccat cagaatgcct       840
     ggataa                                                                  846
//
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