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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP36316; SV 2; linear; genomic DNA; WGS; INV; 819 BP.
XX
PA   CAAC02000558.1
XX
DE   Caenorhabditis briggsae AF16 Hypothetical protein CBG18997
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..819
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="V"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc4126"
FT   CDS             complement(join(CAAC02000558.1:475269..475465,
FT                   CAAC02000558.1:475511..475623,
FT                   CAAC02000558.1:475673..475810,
FT                   CAAC02000558.1:475864..475966,
FT                   CAAC02000558.1:476012..476168,
FT                   CAAC02000558.1:476825..476935))
FT                   /codon_start=1
FT                   /locus_tag="CBG18997"
FT                   /standard_name="CBG18997"
FT                   /product="Hypothetical protein CBG18997"
FT                   /note="contains similarity to Pfam domain PF05875 Alkaline
FT                   phytoceramidase (aPHC) contains similarity to Interpro
FT                   domain IPR008901 (Alkaline phytoceramidase)"
FT                   /db_xref="GOA:A8XUJ1"
FT                   /db_xref="InterPro:IPR008901"
FT                   /db_xref="UniProtKB/TrEMBL:A8XUJ1"
FT                   /protein_id="CAP36316.2"
FT                   /translation="MDSSSISRWFEYESGHAWCESAYKYQTLPYVAEFANTCTNLPIIV
FT                   LPLVNIMLLRRYLHDVNGGLVFPQLLLTFNGLASTYYHATLNLFGQLVDELSLVWIITV
FT                   FLVVYIPVMKWFPERFSKRLTVVRWVVLIVTAVVSALCFLEPNLNAIALMLFSIPAAVV
FT                   IRYEGKQSGIPDIENFPSRILALWGVAFSFWFADRLLCDFWLYLGTPYLHALFHLLAGL
FT                   AGYTIFIMFSMIDIESRSKTHRYTAAVRYFPDKNGSIFSFPYISLKERSQ"
XX
SQ   Sequence 819 BP; 190 A; 197 C; 165 G; 267 T; 0 other; 3326458594 CRC32;
     atggacagtt cgagtataag tcgatggttt gagtatgaat cgggtcatgc gtggtgtgaa        60
     agtgcctaca aatatcagac gttaccgtat gttgcagagt tcgcaaacac atgcacgaat       120
     ctcccaatta tcgttctccc acttgtcaat attatgctcc tccgaagata cctccatgac       180
     gtaaacggcg gtctcgtatt cccacaactc ctgttaacat ttaatggatt agcatccacc       240
     tattatcatg ccacactcaa cttgttcggt caactggttg atgagctttc gttggtgtgg       300
     atcatcacag ttttccttgt agtctatatt ccggttatga agtggttccc agaacgattc       360
     tcgaaacgat taactgtggt ccgatgggtg gtcctgattg taactgccgt tgtttctgct       420
     ctctgcttct tggaaccaaa tcttaatgca atcgctctga tgctcttttc cattcccgca       480
     gcagttgtta tcagatacga aggaaaacag tctggaatcc cagacattga gaacttcccg       540
     agcagaattc ttgctctctg gggagtcgca ttttccttct ggtttgctga tcgtcttctc       600
     tgtgacttct ggctttatct tggtacccca tatctccatg ccttgttcca tttgctcgcc       660
     ggtcttgccg gatacacaat tttcatcatg ttctcaatga ttgatattga aagtcgatcg       720
     aaaactcata gatacactgc tgccgttcgt tatttcccgg ataagaatgg atcgatcttc       780
     tcattcccat acatttctct caaagagcgt tctcagtaa                              819
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