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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP35833; SV 1; linear; genomic DNA; WGS; INV; 1182 BP.
XX
PA   CAAC02000548.1
XX
DE   Caenorhabditis briggsae AF16 C. briggsae CBR-HPD-1 protein
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1182
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="III"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc4079"
FT   CDS             complement(join(CAAC02000548.1:1578100..1578870,
FT                   CAAC02000548.1:1579638..1579958,
FT                   CAAC02000548.1:1580004..1580093))
FT                   /codon_start=1
FT                   /gene="Cbr-hpd-1"
FT                   /locus_tag="CBG18361"
FT                   /standard_name="CBG18361"
FT                   /product="C. briggsae CBR-HPD-1 protein"
FT                   /note="contains similarity to Pfam domain PF00903
FT                   Glyoxalase/Bleomycin resistance protein/Dioxygenase
FT                   superfamily contains similarity to Interpro domains
FT                   IPR005956 (4-hydroxyphenylpyruvate dioxygenase), IPR004360
FT                   (Glyoxalase/bleomycin resistance protein/dioxygenase)"
FT                   /db_xref="GOA:Q60Y65"
FT                   /db_xref="InterPro:IPR004360"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q60Y65"
FT                   /protein_id="CAP35833.1"
FT                   /translation="MTTFDRGEKPDIGTLVAFDHVRFVVGNAKQAAYWYCANFGFEPFA
FT                   YKGLETGSRITAQHAIKQDKIVFVFESALLPDNTELGEHLVQHGDGVKDVCFEVEDLDS
FT                   IVAHAKAAGATIVRDITEESDENGSVRFATLRTYGETDHTLLERKKYKGAFLPGFKPHP
FT                   MPPTFFHSLPRVGLNFLDHCVGNQPDLQMAPAVEWYENILKFHRFWSVDDSMIHTEYSA
FT                   LRSIVVTNFEETIKMPINEPASSNKKAVSQIQEFVDYYGGSGVQHIALNTTDIITAIEA
FT                   LRARGCEFLSIPSSYYDNLRQRLSVSSMKIKEDMDRLQKLHILVDFDENGYLLQIFSKP
FT                   CQDRPTLFLEIIQRQNHQGFGAGNFKALFESIELEQTKRGNLFYENVKDGQHK"
XX
SQ   Sequence 1182 BP; 339 A; 260 C; 259 G; 324 T; 0 other; 1582714533 CRC32;
     atgaccacat tcgaccgagg agagaagcca gatattggaa ctttggtcgc atttgaccat        60
     gttcgatttg tcgttggtaa tgctaaacaa gccgcctact ggtactgtgc caatttcggg       120
     ttcgagccat ttgcgtacaa gggattggag actggctcca gaatcaccgc tcaacacgcc       180
     atcaaacaag ataagattgt tttcgtgttc gaatctgccc tcctgccaga caataccgag       240
     ttgggagagc atttggttca gcatggagat ggagtaaagg atgtttgctt tgaagttgag       300
     gatcttgatt ctattgtggc gcatgcgaag gctgctggag ccacgattgt ccgagacatc       360
     actgaagagt cagatgagaa tggatctgtc agatttgcca cgttgagaac gtatggagaa       420
     accgatcaca ctcttctgga acgcaagaag tataagggag cattcctccc tggcttcaaa       480
     ccccacccaa tgcctccgac attcttccat tctttgccac gtgtcggatt gaacttcctc       540
     gatcattgtg tcggaaatca gccagacctt cagatggcac cagctgtcga gtggtatgag       600
     aatattctca agttccatag attctggtct gttgatgatt ctatgatcca taccgaatat       660
     tccgctctcc gttcgattgt tgtcactaac tttgaagaga ctatcaagat gccaatcaat       720
     gaaccagcat cttctaataa gaaggcagtt tctcagattc aagaatttgt tgattattat       780
     ggaggatctg gagttcaaca cattgctctt aacaccactg acatcatcac tgcaatcgaa       840
     gctctcagag cccgtggatg tgaattcctg tctattccat ccagttatta cgacaatttg       900
     agacaacgat tgtcagtttc ttcaatgaaa attaaagaag acatggatcg ccttcaaaaa       960
     cttcacattc tggttgattt tgatgagaat ggatatctcc ttcaaatctt cagtaagcca      1020
     tgtcaagacc gtccaactct cttcctggaa attatccaaa gacaaaacca tcaaggattc      1080
     ggagcaggaa acttcaaggc tcttttcgaa tcgattgaat tggaacaaac aaagagaggg      1140
     aacctgttct atgagaatgt caaggatgga caacacaagt aa                         1182
//
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