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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP25156; SV 1; linear; genomic DNA; WGS; INV; 996 BP.
XX
PA   CAAC02000460.1
XX
DE   Caenorhabditis briggsae AF16 Hypothetical protein CBG04460
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..996
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="IV"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc0081"
FT   CDS             complement(join(CAAC02000460.1:303251..303349,
FT                   CAAC02000460.1:303989..304093,
FT                   CAAC02000460.1:304142..304259,
FT                   CAAC02000460.1:304321..304490,
FT                   CAAC02000460.1:304657..304777,
FT                   CAAC02000460.1:304933..305142,
FT                   CAAC02000460.1:305186..305358))
FT                   /codon_start=1
FT                   /locus_tag="CBG04460"
FT                   /standard_name="CBG04460"
FT                   /product="Hypothetical protein CBG04460"
FT                   /note="contains similarity to Pfam domain PF01266 FAD
FT                   dependent oxidoreductase contains similarity to Interpro
FT                   domains IPR006076 (FAD dependent oxidoreductase), IPR006181
FT                   (D-amino acid oxidase, conserved site), IPR016040
FT                   (NAD(P)-binding)"
FT                   /db_xref="GOA:A8WXM1"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:A8WXM1"
FT                   /protein_id="CAP25156.1"
FT                   /translation="MLPKIAVIGEGVIGCTSALQIAKAIPNSKITIFHDKPFENSCSAG
FT                   PAGLFRIDYEENTEYGRASFAWFSHLYRTTKGAETGVKLVSGHIQSDNLESLKQQQRAY
FT                   GDIVYNFRFLDDRERLDIFPSPSKHCIHYTAYASEGNKYVPYLKRLLLEQKVEFQQKNV
FT                   ENLDTIADAGYDVIVNCAGLYGGKLAGDDDQCYPIRGVILEVDAPWHKHFNYRDFTTFT
FT                   IPKENSVVIGSTKQDNRWDLEITDEDRNDILSRYIELHPGMREPKILKEWSALRPGRKH
FT                   VRIESQQRKTTETGKEYTVVHHYGHGSNGFTLGWGTAIEATKLVKKALGL"
XX
SQ   Sequence 996 BP; 297 A; 206 C; 231 G; 262 T; 0 other; 2402831658 CRC32;
     atgctcccaa aaattgccgt tattggagaa ggcgtcattg gatgcacatc tgctctacaa        60
     atcgctaaag ccatcccaaa ctccaaaatc accattttcc acgacaaacc gtttgaaaat       120
     tcgtgtagcg ctggaccagc cggcttgttc agaattgatt atgaggagaa taccgaatac       180
     ggacgcgctt cgttcgcctg gttttctcac ctctaccgta ctacaaaagg ggcggagact       240
     ggcgtcaaat tggtttctgg acatattcaa tcagacaatt tggaatcatt gaaacaacaa       300
     cagagagctt atggggatat tgtgtataat ttcagatttt tggatgatcg tgagagattg       360
     gatattttcc ccagtccatc gaaacactgc atccactaca ctgcttacgc ttctgaaggc       420
     aacaagtatg ttccatacct caaacgtcta cttttggagc aaaaagtgga gttccaacag       480
     aagaacgtcg agaatttgga tacaattgcc gatgctggct acgatgtgat tgtgaattgt       540
     gcaggcttat atggtggcaa gttagctggc gatgatgacc aatgttaccc aattcgaggt       600
     gtcattttgg aagtcgatgc tccatggcac aaacatttca attatcgaga ttttacgact       660
     ttcacaattc caaaagagaa cagtgtggtt atcggatcca cgaaacagga taatcgttgg       720
     gatcttgaga tcactgatga ggatcgcaat gatattttga gcagatacat tgagttgcat       780
     cccggaatgc gggaaccaaa gattctgaaa gagtggtccg cacttcgtcc aggcaggaag       840
     catgtcagaa ttgaatctca gcaacggaaa actactgaaa ccgggaagga atatactgtt       900
     gttcatcact atggtcatgg aagtaatggc ttcacactcg gatggggaac cgccattgag       960
     gctacaaaat tggtcaagaa agctctcgga ctttaa                                 996
//
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