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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP24824; SV 3; linear; genomic DNA; WGS; INV; 909 BP.
XX
PA   CAAC02000457.1
XX
DE   Caenorhabditis briggsae AF16 C. briggsae CBR-AIR-2 protein
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..909
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="I"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT   CDS             join(CAAC02000457.1:1287130..1287188,
FT                   CAAC02000457.1:1287234..1287342,
FT                   CAAC02000457.1:1287390..1287757,
FT                   CAAC02000457.1:1287803..1288076,
FT                   CAAC02000457.1:1288127..1288225)
FT                   /codon_start=1
FT                   /gene="Cbr-air-2"
FT                   /locus_tag="CBG04030"
FT                   /standard_name="CBG04030"
FT                   /product="C. briggsae CBR-AIR-2 protein"
FT                   /note="contains similarity to Pfam domain PF00069 Protein
FT                   kinase domain contains similarity to Interpro domains
FT                   IPR017441 (Protein kinase, ATP binding site), IPR002290
FT                   (Serine/threonine protein kinase), IPR008271
FT                   (Serine/threonine protein kinase, active site), IPR000719
FT                   (Protein kinase, core), IPR001245 (Tyrosine protein
FT                   kinase), IPR017442 (Serine/threonine protein kinase-
FT                   related)"
FT                   /db_xref="GOA:Q61XD3"
FT                   /db_xref="InterPro:IPR002290"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q61XD3"
FT                   /protein_id="CAP24824.3"
FT                   /translation="MENKPQILQTKSKNTPNKGGKLSINDFEIGRPLGKGKFGSVYLAR
FT                   TKTGHFHCAIKVLFKSQLISGGVEHQLEREIEIQSHLQHPNIIRLYNYFWDAKKIYLIL
FT                   EYAPGGEMYKQLTTQKRFTEAMAGKYMYEIADALSYCHRKNVIHRDIKPENLLIGAQGE
FT                   LKIGDFGWSVHAPSNKRQTMCGTMDYLPPEMVNGNSHSDAVDLWAIGVLCYEFLVGKPP
FT                   FEHENQADTYSAIKAGRFTYPDFVKKGARDLIGKLLVVDPRRRCSLQEVKDHYWVTSML
FT                   DSCRRAAEKQKAERAASLRDH"
XX
SQ   Sequence 909 BP; 299 A; 191 C; 211 G; 208 T; 0 other; 2288706296 CRC32;
     atggaaaata agccccaaat acttcaaact aaatcgaaaa acactccgaa caagggagga        60
     aaattgtcta ttaacgattt cgaaattgga cgacctctgg gaaagggtaa atttggaagc       120
     gtctacctcg cgagaacgaa aacgggtcat ttccactgtg ccataaaagt actcttcaaa       180
     tcacaactga tttctggagg agtcgaacat cagctggaac gggaaatcga aattcagtcc       240
     catctacaac atccgaatat catccggctc tacaattatt tctgggatgc gaaaaagatt       300
     tacctgattc tcgaatacgc tccaggtggt gaaatgtaca agcaactcac cacacagaaa       360
     aggttcactg aagcaatggc tggaaaatat atgtatgaaa ttgccgatgc tctgtcttac       420
     tgtcatagaa aaaacgtcat tcatcgagac atcaagcctg agaacttatt gattggggca       480
     caaggagaac tgaaaatagg agatttcgga tggagtgttc atgcgccttc caacaagcgt       540
     caaacaatgt gtggaacaat ggactacctg ccaccagaaa tggtcaatgg aaattcgcat       600
     agtgacgccg tcgatttatg ggctatcgga gtgctttgct acgaattcct ggtgggcaaa       660
     ccgccatttg aacacgagaa tcaagccgat acctactctg caatcaaagc tgggagattc       720
     acatatcccg attttgtgaa gaaaggagca agagatctaa ttggaaaact tctcgttgtt       780
     gatccaagga gaagatgttc acttcaggag gtgaaagacc actactgggt cacatcgatg       840
     ttggacagct gccgacgagc tgctgagaaa cagaaggctg aaagagcagc aagtcttcgg       900
     gaccactag                                                               909
//
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