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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP24126; SV 3; linear; genomic DNA; WGS; INV; 1794 BP.
XX
PA   CAAC02000450.1
XX
DE   Caenorhabditis briggsae AF16 C. briggsae CBR-PKC-3 protein
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1794
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="II"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc0058"
FT   CDS             complement(join(CAAC02000450.1:3735391..3735516,
FT                   CAAC02000450.1:3735562..3735904,
FT                   CAAC02000450.1:3735951..3736309,
FT                   CAAC02000450.1:3736357..3736608,
FT                   CAAC02000450.1:3736905..3737081,
FT                   CAAC02000450.1:3737221..3737347,
FT                   CAAC02000450.1:3737420..3737504,
FT                   CAAC02000450.1:3737555..3737695,
FT                   CAAC02000450.1:3737740..3737857,
FT                   CAAC02000450.1:3738089..3738154))
FT                   /codon_start=1
FT                   /gene="Cbr-pkc-3"
FT                   /locus_tag="CBG02381"
FT                   /standard_name="CBG02381"
FT                   /product="C. briggsae CBR-PKC-3 protein"
FT                   /note="contains similarity to Pfam domain PF00069 Protein
FT                   kinase domain contains similarity to Interpro domains
FT                   IPR017441 (Protein kinase, ATP binding site), IPR012233
FT                   (Protein kinase C, zeta/iota), IPR002290 (Serine/threonine
FT                   protein kinase), IPR008271 (Serine/threonine protein
FT                   kinase, active site), IPR000719 (Protein kinase, core),
FT                   IPR001245 (Tyrosine protein kinase), IPR017442
FT                   (Serine/threonine protein kinase-related), IPR000961 (AGC-
FT                   kinase, C-terminal), IPR002219 (Protein kinase C, phorbol
FT                   ester/diacylglycerol binding)"
FT                   /db_xref="GOA:A8WUG4"
FT                   /db_xref="InterPro:IPR002290"
FT                   /db_xref="UniProtKB/Swiss-Prot:A8WUG4"
FT                   /protein_id="CAP24126.3"
FT                   /translation="MSSPTSVEEDGDIKLKTRFHGQVVVLYARPPLILDDFFALLRDAC
FT                   KQHAKQDITVKWIDEDGDPISIDSQMELDEAVRCLNVSQEAELNIHVFVGKPELPGLPC
FT                   QGEDKTVYRRGARRWKKIYLYNGHRFQGKRLNRRIQCFICHDYIWGIGRQGFRCVDCRL
FT                   CVHKKCHRHVRTHCGQTPQGPNVPVAPSSGVGSLRGGRLDTSSSTTRSGGGIDNGAFHE
FT                   HEIESPGSAKDMSRSTNGNGASKWAVSLNDFRLLTVIGRGSYAKVVQAEHIATRQIYAI
FT                   KIIKKEMFNEDEDIDWVQTEKSVFEAASNYPFLVGLHSCFQTESRLFFVIEFVPGGDLM
FT                   FHMQQQRRLPEEHARFYSGEIILALHFLHSRGIIYRDLKLDNVLIDAEGHIKLTDYGMC
FT                   KENINAGDLTSTFCGTPNYIAPEILRGDEYGFSVDWWALGVLMFEMMAGRSPFDIVGMQ
FT                   NSEENTEDYLFQIILERQIRIPRSLSVRASNILKGFLNKDPSQRLGCKLDINDGLNDMK
FT                   EHDFFRGFIDWEALEQKAVAPPYHPAVESDRDLTHFDHQFTDEPPQLSPDNSAVIARID
FT                   QSEFDGFEYVNPLQMSREDSV"
XX
SQ   Sequence 1794 BP; 531 A; 394 C; 417 G; 452 T; 0 other; 4230503466 CRC32;
     atgtcctcgc caacatccgt cgaagaggat ggggatatta aactgaaaac gaggtttcac        60
     ggacaggttg ttgttctgta tgctcgccca ccactcatcc tcgacgactt cttcgcactg       120
     ctccgtgacg cctgcaaaca acatgcaaaa caggatatca cagtaaaatg gattgatgaa       180
     gatggagatc caatttctat cgactctcaa atggaacttg acgaagctgt gcgttgtctg       240
     aacgtcagtc aagaagccga gctgaatatt cacgtctttg ttggaaaacc agagttgcca       300
     ggacttccat gtcaaggaga agataagaca gtatacaggc gtggcgcacg gagatggaag       360
     aaaatctact tgtacaatgg gcatagattc caagggaaac ggcttaacag acgcattcaa       420
     tgcttcattt gtcacgacta catctgggga atcgggcggc aaggttttcg atgcgtagat       480
     tgtcgactat gcgttcacaa aaaatgtcat cggcacgtcc gaacacattg cggccagacc       540
     ccacaaggac cgaatgttcc agtggctcca agcagtggag ttggatcact cagaggcggc       600
     agattagaca ccagctcatc cacaacacga tctggaggtg gaatcgacaa cggagcattc       660
     catgagcatg agattgaatc gcctggatca gcaaaagata tgagtagaag cacgaatgga       720
     aacggcgcat cgaagtgggc agtttcactc aacgacttcc gcttgttaac tgtgattgga       780
     cgtggatcat atgccaaagt tgttcaagca gagcacatcg caacccgtca gatttatgca       840
     ataaaaatca tcaaaaagga aatgttcaac gaggatgaag atattgactg ggtgcaaacc       900
     gaaaaatcgg tattcgaagc tgcgtccaac tatccattcc tcgttggatt gcactcatgt       960
     ttccagactg aatctcgtct cttcttcgtc atcgaattcg ttccaggcgg cgatttgatg      1020
     tttcatatgc agcagcaaag aagacttcca gaagagcatg ctagattcta ttctggcgaa      1080
     atcattcttg ctttacattt ccttcattct cgtggaatta tttatcgaga tctgaaactt      1140
     gacaacgtgc ttatcgatgc agaaggacac atcaaattga cagattacgg aatgtgcaag      1200
     gagaatataa atgcgggtga tttgacatcg acattctgtg gaacgccaaa ctacattgca      1260
     ccagaaatat tacgaggtga tgaatacggg ttcagtgttg actggtgggc actgggtgtt      1320
     cttatgtttg aaatgatggc tggccgttct ccattcgata ttgtcggaat gcaaaactct      1380
     gaagagaaca ctgaagatta tttgttccaa atcattctcg aaagacaaat tcgtatccca      1440
     cgatcgcttt cagttcgtgc ttccaatatc ctcaaagggt tcctcaataa agatccatcg      1500
     cagcgattgg gatgcaaatt agatatcaat gacggactca acgatatgaa agaacatgac      1560
     ttcttccgag gattcattga ttgggaagca ctggaacaga aagctgttgc tccgccatat      1620
     catccagctg tggagagtga tcgcgatttg acgcatttcg accaccagtt caccgacgaa      1680
     ccaccacagc tttctccaga caattcagct gtcatcgcgc gcatcgatca atcagaattc      1740
     gatggtttcg aatatgtgaa tccattacaa atgagtcgag aagattcagt ttaa            1794
//
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