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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAP23809; SV 1; linear; genomic DNA; WGS; INV; 1398 BP.
XX
PA   CAAC02000450.1
XX
DE   Caenorhabditis briggsae AF16 Hypothetical protein CBG02769
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1398
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="II"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT                   /clone="cb25.fpc0058"
FT   CDS             join(CAAC02000450.1:2161907..2162018,
FT                   CAAC02000450.1:2162397..2162464,
FT                   CAAC02000450.1:2162515..2162597,
FT                   CAAC02000450.1:2162766..2163357,
FT                   CAAC02000450.1:2163405..2163716,
FT                   CAAC02000450.1:2163767..2163884,
FT                   CAAC02000450.1:2164087..2164199)
FT                   /codon_start=1
FT                   /locus_tag="CBG02769"
FT                   /standard_name="CBG02769"
FT                   /product="Hypothetical protein CBG02769"
FT                   /note="contains similarity to Pfam domain PF00465 Iron-
FT                   containing alcohol dehydrogenase contains similarity to
FT                   Interpro domains IPR018211 (Alcohol dehydrogenase, iron-
FT                   type, conserved site), IPR001670 (Alcohol dehydrogenase,
FT                   iron-type)"
FT                   /db_xref="GOA:A8WTJ7"
FT                   /db_xref="InterPro:IPR018211"
FT                   /db_xref="UniProtKB/Swiss-Prot:A8WTJ7"
FT                   /protein_id="CAP23809.1"
FT                   /translation="MSASLARGMLHKMGGSCCPHHAPTTNPFRMAKLHGNNKSTDYAFE
FT                   MVCSTLRFGKGVTLEIGYDVRNLGAKKTLLITDKNVQNTIAFKNAEQALKMVNIEYEIF
FT                   DDVLIEPSEKSMQKAIAFAKSKPFDSFIAVGGGSVIDTTKAAALYASNPEADFLDFVGP
FT                   PFGKSLQPKNPMLPLIAVPTTAGTGSETTAAAIMDLPEHKCKTGIRLRCIKPYLAVVDP
FT                   LNVMSMPRNVAIYSGFDVLCHALESYTALPYDQRSPRPARPEVRPVYQGSNPISDVWSR
FT                   EALRIIGQYFRRSVFDPSDEEARTEMLKASSFAGIGFGNAGVHLCHGLSYPISSQAKGC
FT                   VAHDYPQDKNLIPHGLSVMTTAVADFEFTTAACPDRHLVAAQTLGADIPNNADNEYISR
FT                   TLCDQLRGFMKDFGVPNGLKGMGFEYSDIDHLTEAASHSVPNIVISPKSTDRDIISKLY
FT                   EKSLTVY"
XX
SQ   Sequence 1398 BP; 398 A; 327 C; 298 G; 375 T; 0 other; 2708930069 CRC32;
     atgagcgcaa gcttggcacg tggtatgctc cacaaaatgg gtggatcttg ttgtcctcat        60
     catgcaccaa ctacgaatcc attcagaatg gcaaaacttc atggaaataa taaatccact       120
     gactatgctt tcgaaatggt ctgctctact cttcgttttg gaaaaggtgt cactttggag       180
     atcggatacg acgtccgcaa tctcggagcg aaaaagacac tgttgattac tgataagaat       240
     gtgcagaata ctattgcatt caaaaatgcc gaacaagctt tgaaaatggt gaacatcgaa       300
     tacgaaatat tcgatgacgt gctcattgaa ccatccgaga aaagtatgca aaaagcaatc       360
     gcttttgcca aatcgaaacc attcgacagt ttcatcgcag tcggtggagg ttctgtgatt       420
     gacacaacca aggcagcagc tctctacgca tcaaatccag aagccgattt cctggatttt       480
     gtcggtcccc catttggaaa atctctccaa cccaaaaatc cgatgctacc tcttatcgcc       540
     gtaccaacca ccgctggaac tggatccgaa acaactgcag ctgccattat ggaccttccg       600
     gaacacaagt gtaaaactgg aatccgattg agatgcatca aaccgtatct ggcagttgtg       660
     gatccattaa atgtcatgag catgccaaga aatgtggcaa tctattctgg attcgatgtt       720
     ctttgtcatg ctcttgagag ctacaccgct cttccatatg atcagcgatc tccacgacca       780
     gctcgtccag aagttcgtcc agtttatcaa ggatctaatc cgatcagtga tgtctggagt       840
     agagaagcct tgagaatcat cggacaatat ttccggcgtt ctgtgttcga tccatcggac       900
     gaggaagctc gtacagaaat gctcaaagcc agctctttcg ctggaattgg gttcgggaac       960
     gccggggtcc atctgtgtca tggactctca tacccaatca gttctcaagc aaaaggatgt      1020
     gttgctcacg attatccaca agacaagaat cttattccac atggactttc tgttatgaca      1080
     actgcagtcg ctgattttga gtttacgact gccgcgtgtc cagatagaca tttagttgct      1140
     gctcagactc ttggagctga tattccgaac aacgcggata acgaatatat ctctcgaacc      1200
     ctgtgtgatc aattgagagg attcatgaag gacttcggtg ttccaaatgg tttgaaagga      1260
     atgggattcg agtattcaga tattgaccat ctcaccgagg cagccagtca ctcagttccc      1320
     aacattgtca tttctccaaa atccacagat cgtgacatta tttctaaact ttatgaaaag      1380
     tccctcactg tatattag                                                    1398
//
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