EBI Dbfetch

ID   CAP22198; SV 1; linear; genomic DNA; WGS; INV; 1071 BP.
XX
PA   CAAC02000444.1
XX
DE   Caenorhabditis briggsae AF16 C. briggsae CBR-SQV-8 protein
XX
KW   WGS.
XX
OS   Caenorhabditis briggsae AF16
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=473542;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1071
FT                   /organism="Caenorhabditis briggsae AF16"
FT                   /chromosome="II"
FT                   /strain="AF16"
FT                   /mol_type="genomic DNA"
FT   CDS             join(CAAC02000444.1:3651..3788,CAAC02000444.1:3835..3938,
FT                   CAAC02000444.1:4486..4982,CAAC02000444.1:5030..5361)
FT                   /codon_start=1
FT                   /gene="Cbr-sqv-8"
FT                   /locus_tag="CBG01067"
FT                   /standard_name="CBG01067"
FT                   /product="C. briggsae CBR-SQV-8 protein"
FT                   /note="contains similarity to Pfam domain PF03360
FT                   Glycosyltransferase family 43 contains similarity to
FT                   Interpro domain IPR005027 (Glycosyl transferase, family
FT                   43)"
FT                   /db_xref="GOA:Q5CAS0"
FT                   /db_xref="InterPro:IPR005027"
FT                   /db_xref="UniProtKB/TrEMBL:Q5CAS0"
FT                   /protein_id="CAP22198.1"
FT                   /translation="MISSRIFEKWWLRAFVALVIFFIWQICYAINKVQGLEEEKTVLQA
FT                   TIEVLKRKSDMLRTEIHEKERTLTRLDGRIEEIDTQIRDHISLLPRVNRSTPFIYFVTP
FT                   THFRAAQKADLTRLSYTLSHVPNLHWIVVEDSDSLTSSVAEILKRSRLPYTHLNARTPS
FT                   AQKMKYTDPNWTLPRGVEQRNAALLWIQNQLSGVGSGVVYFGDDDNTYDLKIFEEMRKV
FT                   DNAGVWPVGIVGGMFVETPVLADNGSIISFNSIWKPDRPFPIDMAAFAVNVTLILSHPN
FT                   ALFSFDVPRGYQESTFLENLGIDRLNMEPLAEKCTKVYVWHTRTEKSKLSKGMVEKLTK
FT                   KTGFNELESHALGVAY"
XX
SQ   Sequence 1071 BP; 315 A; 232 C; 250 G; 274 T; 0 other; 3498180813 CRC32;
     atgatttcat caagaatatt cgaaaaatgg tggttgcggg cgttcgttgc tctcgtaata        60
     ttcttcatct ggcaaatttg ttatgcaatt aataaggttc aaggactcga ggaagagaag       120
     acagtgttac aggcaacaat agaagtgctg aaacggaaga gcgatatgct gcgaactgaa       180
     atccacgaaa aagaacgaac gctaactcga ttggacggac ggatagagga aattgataca       240
     caaatcagag atcacatatc cttactgcca cgtgtcaatc gatccactcc attcatctac       300
     ttcgttacac ccacacattt ccgcgccgcc caaaaagctg acctcactcg tctctcctac       360
     actctctcgc acgttcccaa cctccattgg atcgtcgtgg aagattctga tagcttaacg       420
     tcgtctgtag cagagatttt gaagcgctcg cgtctaccat atacacatct aaacgcgcga       480
     acaccatcag ctcaaaaaat gaagtatact gatccgaact ggactttgcc acgaggtgtt       540
     gaacaaagaa atgctgctct tttatggatt caaaatcagt tgtccggtgt cggaagtgga       600
     gttgtatatt ttggagacga tgataacact tatgacttga aaatttttga agagatgagg       660
     aaggtggata acgccggagt gtggccagta ggaatagttg gaggaatgtt tgtggagacg       720
     ccggttctcg ctgataacgg atctataatc tcgttcaatt cgatatggaa acctgaccgc       780
     ccgtttccga ttgatatggc agctttcgca gtcaacgtca ccttgattct ctcgcatccc       840
     aacgctcttt tctcgttcga cgtgccacgt ggatatcagg aatctacatt tttggagaac       900
     ctaggaatcg atcggctcaa catggagccg ttggctgaga agtgtaccaa agtctatgta       960
     tggcatacaa ggacggaaaa atcaaagtta tcaaaaggaa tggtcgagaa actgacgaaa      1020
     aagactgggt tcaacgagct ggaatcacat gcgctcggtg ttgcatactg a               1071
//