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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAN88585; SV 1; linear; genomic DNA; STD; VRT; 1848 BP.
XX
PA   BX901896.7
XX
DE   Danio rerio (zebrafish) novel protein similar to vertebrate
DE   asparagine-linked glycoslyation 9 homolog (ALG9) (zgc:63820)
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1848
FT                   /organism="Danio rerio"
FT                   /chromosome="5"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="DanioKey"
FT                   /clone="DKEY-71L1"
FT   CDS             join(BX901896.7:33123..33268,BX901896.7:33906..34041,
FT                   BX901896.7:36345..36479,BX901896.7:36772..36842,
FT                   BX901896.7:36941..37029,BX901896.7:39491..39626,
FT                   BX901896.7:40384..40471,BX901896.7:40876..40981,
FT                   BX901896.7:41123..41245,BX901896.7:42977..43131,
FT                   BX901896.7:44685..44814,BX901896.7:45009..45156,
FT                   BX901896.7:46620..46749,BX901896.7:48367..48497,
FT                   BX901896.7:51664..51787)
FT                   /gene="DKEY-71L1.4"
FT                   /locus_tag="DKEY-71L1.4-001"
FT                   /standard_name="OTTDARP00000019004"
FT                   /product="novel protein similar to vertebrate
FT                   asparagine-linked glycoslyation 9 homolog (ALG9)
FT                   (zgc:63820)"
FT                   /note="match: proteins: Sw:Q8VDI9 Sw:Q9H6U8"
FT                   /db_xref="GOA:A5PMV6"
FT                   /db_xref="InterPro:IPR005599"
FT                   /db_xref="UniProtKB/TrEMBL:A5PMV6"
FT                   /db_xref="ZFIN:ZDB-GENE-040426-1270"
FT                   /protein_id="CAN88585.1"
FT                   /translation="MATKSLRQRSRRGSKQDANNVNNTPTPENRATKDDKCAEDNKSSD
FT                   PRNESSGKAGQVWAPEGSTAFKCLVSARFCAALLSNLSDCDETFNYWEPTHYLLYGTGM
FT                   QTWEYSPSYAIRSYAYLWLHALPACFHAKILQTNKVLVFYFLRCMLAFGCCVCELYFYK
FT                   AVCKKFGLHVGRLLLAFLVLSAGMFCSSAAFLPSTFCMYSTVVAMTGWFQGRPSLAVLG
FT                   VAAGAIVGWPFSALLGIPIAFDLLWLKKKWKSFIMWTLVALLLFLVPVVIVDSYYYGKL
FT                   VIAPLNIILYNVFTPHGPDLYGTEPWHYYFVNGFLNFNIVFVLALFSLPLTALMEALLQ
FT                   RFNVQNLGRPYWLTLSPMYLWMLVFFTRPHKEERFLFPIYPLICLCGAVALSSLQKCYH
FT                   FIFQRYRLEHYTISSNWLALGSVLLFGVLSLSRSVALFRGYHAPLDLYPEFHRIAKDPA
FT                   IHTVPEGRLVNVCVGKEWYRFPSSFFLPNNWHLQFIQSEFRGQLPKPYAMGPDATWIIP
FT                   PDMNDQNLEETSRYVDLKQCHYLVDLATETEAPREPRYAANKEEWSVIADKPFLDSTRS
FT                   SRILRAFFIPFLSEQYNTYSRYVILKPRRPKHTRKRPQA"
XX
SQ   Sequence 1848 BP; 404 A; 485 C; 448 G; 511 T; 0 other; 603878747 CRC32;
     atggcgacga agagtctccg tcagcgcagc agacggggga gcaaacagga cgccaacaac        60
     gtgaacaaca cacctacccc tgaaaaccga gccacaaaag acgacaaatg tgctgaggac       120
     aataagtcca gtgacccccg aaatgagtca tccggtaagg caggtcaggt ttgggctcct       180
     gagggctcca cagccttcaa gtgcctggtt tcagcccgct tctgtgccgc actgctcagt       240
     aacctctctg actgtgatga aaccttcaat tactgggagc caactcacta cttgctctat       300
     ggaacaggga tgcagacatg ggagtattcc ccatcctacg ccattcgttc ctatgcgtat       360
     ctctggctcc atgcccttcc tgcctgcttt catgccaaaa tattacagac aaacaaggtc       420
     cttgtgtttt atttcctgcg ctgcatgtta gcgtttggct gttgtgtgtg tgagctctac       480
     ttctataagg ctgtgtgtaa gaaatttggc ctacatgtgg gacggcttct gctggcgttc       540
     ctcgtcctga gtgcagggat gttctgctcc tctgcagctt tcctgccaag tactttttgc       600
     atgtacagta cagtggtagc tatgactggc tggtttcagg ggcgtccgag tctggctgtg       660
     ctgggtgtcg cagcaggggc cattgtgggc tggcccttca gtgctctgct tgggataccc       720
     attgcctttg accttctgtg gctgaagaag aaatggaaga gttttatcat gtggacacta       780
     gtggcattgc tgctctttct ggtccctgtg gttatagtag acagctacta ctatggcaag       840
     ctggtgattg ctcctctgaa tataatactg tacaatgtat ttactcctca tgggccagat       900
     ctctatggca cagagccctg gcattactac tttgtgaatg gttttcttaa tttcaacatt       960
     gtgtttgtgt tggccctgtt ttctcttcct ctcacggcgc ttatggaggc actgcttcaa      1020
     agattcaatg ttcagaacct cggccggccg tactggttaa ctttgtctcc aatgtacctg      1080
     tggatgctgg tcttcttcac tcgcccgcat aaagaggaac gctttctgtt tcccatctac      1140
     ccgctcatct gtctgtgcgg ggcagtggcg ctctcctcat tgcagaagtg ctatcacttc      1200
     atttttcaac gctatcgtct ggagcactac actatctcct ccaactggct ggctctgggt      1260
     tctgtgctgc tgtttggagt gctctcgctg tctcgatctg tggccctatt cagaggctat      1320
     catgctccgc tggatttgta cccagagttt catcgcattg ctaaagatcc tgcaatccac      1380
     accgttccag agggaagact ggtcaatgtt tgtgtcggga aagagtggta ccgctttccc      1440
     agcagctttt tcctgcctaa caactggcac ctacagttta tccagtcaga attcaggggt      1500
     cagttaccta agccatatgc catgggtcct gatgccacct ggatcatccc accagacatg      1560
     aatgatcaga atcttgagga gacatcacga tacgtagatt tgaagcagtg tcattacctg      1620
     gtggatctgg caacagaaac tgaagcccct cgtgaaccac gatatgccgc gaacaaagag      1680
     gagtggagcg ttattgctga caagcctttt ctagactcta ccaggtcctc cagaattctc      1740
     agggcctttt ttatcccgtt tctgtcagag caatacaaca cctacagcag atacgtcatc      1800
     ctcaaaccga ggcgacccaa acacacgcgg aagagaccgc aggcctga                   1848
//
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