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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAN00915; SV 1; linear; genomic DNA; STD; PRO; 1518 BP.
XX
PA   AM711867.1
XX
DE   Clavibacter michiganensis subsp. michiganensis NCPPB 382 putative
DE   L-arabinose isomerase
XX
OS   Clavibacter michiganensis subsp. michiganensis NCPPB 382
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Micrococcineae; Microbacteriaceae; Clavibacter.
OX   NCBI_TaxID=443906;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1518
FT                   /organism="Clavibacter michiganensis subsp. michiganensis
FT                   NCPPB 382"
FT                   /sub_species="michiganensis"
FT                   /strain="NCPPB 382"
FT                   /mol_type="genomic DNA"
FT   CDS             AM711867.1:1001346..1002863
FT                   /transl_table=11
FT                   /gene="araA"
FT                   /locus_tag="CMM_0878"
FT                   /product="putative L-arabinose isomerase"
FT                   /function="L-arabinose isomerase"
FT                   /EC_number="5.3.1.4"
FT                   /note="putative L-arabinose isomerase (Q9RHG2|ARAA_MYCSM
FT                   L-arabinose isomerase;; Q9S467|ARAA_BACST L-arabinose
FT                   isomerase). pfam02610, Arabinose_Isome, L-arabinose
FT                   isomerase. This is a family of L-arabinose isomerases,AraA,
FT                   EC:5.3.1.4. These enzymes catalyse the reaction:
FT                   L-arabinose <=> L-ribulose. InterPro: L-arabinose
FT                   isomerase"
FT                   /note="High confidence in function and specificity"
FT                   /db_xref="GOA:A5CPB7"
FT                   /db_xref="InterPro:IPR003762"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5CPB7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAN00915.1"
FT                   /translation="MSRITTSLDHYEVWFLTGSQNLYGEETLQQVAEQSQEIARQLEEA
FT                   SDIPVRVVWKPVLKDSDSIRRMALEANASDGTIGLIAWMHTFSPAKMWIQGLDALQKPF
FT                   LHLHTQANVALPWSSIDMDFMNLNQAAHGDREFGYIQSRLGVVRKTVVGHVSTESVRAS
FT                   IGTWMRAAAGWAAVHELKVARFGDNMRNVAVTEGDKTEAELKFGVSVNTWGVNDLVARV
FT                   DAATDAEIDALVDEYETLYDIQPELRRGGERHESLRYGAAIELGLRSFLEEGGFGAFTT
FT                   SFEDLGGLRQLPGLAVQRLMAEGYGFGAEGDWKTAVLIRAAKVMGSGLPGGASLMEDYT
FT                   YHLVPGEEKILGAHMLEICPTLTTGRPSLEIHPLGIGGREDPVRLVFDTDPGPAVVVAM
FT                   SDMRDRFRIVANVVEVVPLDEPLPNLPVARAVWKPAPDLATSAAAWLTAGAAHHTVMST
FT                   QVGVEVFEDFAEIARTELLVIDEDTTLKGFTKEVRWNQAYHRLAQGL"
XX
SQ   Sequence 1518 BP; 251 A; 562 C; 501 G; 204 T; 0 other; 2950445276 CRC32;
     gtgagccgca tcaccacctc cctcgaccac tacgaggtct ggttcctcac gggcagccag        60
     aacctctacg gcgaggagac gctccagcag gtcgccgagc agtcgcagga gatcgcccgg       120
     cagctcgagg aggcgtcgga catccccgtg cgcgtcgtgt ggaagcccgt cctcaaggac       180
     tccgacagca tccgccggat ggccctcgag gccaacgcga gcgacggcac catcggcctc       240
     atcgcctgga tgcacacgtt cagccccgcg aagatgtgga tccagggcct ggacgccctg       300
     cagaagccct tcctccacct gcacacgcag gccaacgtcg cgctgccctg gagcagcatc       360
     gacatggact tcatgaacct gaaccaggcc gcgcacggcg accgcgagtt cggctacatc       420
     cagtcgcgcc tcggcgtcgt ccgcaagacg gtcgtcggcc acgtgagcac cgagtccgtg       480
     cgcgccagca tcggcacgtg gatgcgagcc gccgccggct gggccgcggt ccacgagctc       540
     aaggtcgccc gcttcggcga caacatgcgc aacgtggcgg tcaccgaggg cgacaagacg       600
     gaggccgagc tcaagttcgg cgtctcggtc aacacctggg gcgtcaacga cctcgtcgcg       660
     cgcgtggacg cagcgaccga cgcggagatc gacgcgctgg tcgacgagta cgagaccctc       720
     tacgacatcc agcccgagct gcggcgcggc ggggagcggc acgagtcgct ccgctacggc       780
     gcggccatcg agctcggcct tcgctccttc ctcgaggagg gcggcttcgg cgccttcacg       840
     acgagcttcg aggacctcgg cggcctccgc cagctccccg gcctcgccgt gcagcggctc       900
     atggccgagg gctacggctt cggcgccgag ggggactgga agacggccgt gctgatccgc       960
     gcggcgaagg tcatgggctc cgggctcccg ggtggcgcga gcctcatgga ggactacacg      1020
     taccacctcg tccccggcga ggagaagatc ctgggcgcgc acatgctcga gatctgcccc      1080
     acgctcacga ccggccgacc gagcctcgag atccacccgc tcggcatcgg cggacgcgag      1140
     gaccccgtgc gcctcgtctt cgacaccgac cccggccccg cggtcgtcgt cgcgatgtcg      1200
     gacatgcgcg accgcttccg catcgtcgcg aacgtcgtgg aggtcgtgcc gctcgacgag      1260
     ccgctcccga acctgcccgt cgcccgcgcc gtgtggaagc ccgcgccgga tctcgcgacg      1320
     agcgcagcgg cctggctcac cgccggggcc gcccaccaca cggtcatgag cacgcaggtc      1380
     ggcgtcgagg tcttcgagga cttcgccgag atcgcgcgca ccgagctcct cgtcatcgac      1440
     gaggacacga ccctcaaggg tttcaccaag gaagtccgct ggaaccaggc gtaccaccgc      1500
     ctggcccagg gcctgtaa                                                    1518
//
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