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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAM56537; SV 1; linear; genomic DNA; STD; VRT; 847 BP.
XX
PA   BX640577.17
XX
DE   Danio rerio (zebrafish) partial novel protein similar to vertebrate
DE   beta1,4-N-acetylgalactosaminyltransferases IV (Beta4GalNAc-T4)
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..847
FT                   /organism="Danio rerio"
FT                   /chromosome="4"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="DanioKey"
FT                   /clone="DKEY-117O14"
FT   CDS             complement(join(BX640577.17:191977..192091,
FT                   BX640577.17:193410..193536,BX640577.17:194958..195111,
FT                   BX640577.17:195237..195309,BX640577.17:195399..195552,
FT                   BX640577.17:196319..>196542))
FT                   /codon_start=2
FT                   /locus_tag="DKEY-117O14.2-001"
FT                   /standard_name="OTTDARP00000017008"
FT                   /product="novel protein similar to vertebrate
FT                   beta1,4-N-acetylgalactosaminyltransferases IV
FT                   (Beta4GalNAc-T4)"
FT                   /note="match: proteins: Tr:Q6L9W6 Tr:Q6ZNC1 Tr:Q766D5
FT                   Tr:Q76KP1 Tr:Q8N7T6 Tr:Q96LV2"
FT                   /db_xref="GOA:A3KQF6"
FT                   /db_xref="InterPro:IPR008428"
FT                   /db_xref="UniProtKB/TrEMBL:A3KQF6"
FT                   /protein_id="CAM56537.1"
FT                   /translation="GYSLLRVVNVVKREDKDLGSRYLVELELVDPQGQTVLVSRYIYAQ
FT                   DENSSKPALLCSPKAFNWNPSATVHIIVAVKDQARWIIQFIREMEKIYQATGDKNFNVI
FT                   IVDYNSSDINIEKRLEMAKLPSYKLKKMGGNFERSGGLQAGIDLVEDEHSILFLCDLHL
FT                   YYPVTIINSIRKHCVEGKMVYAPVVMRLDCGASPRTPNGFWEIAGYGLMGIYKSDMDRI
FT                   GGMNTVEFKDKWGGEDWELLDRVLGNGLEVERLHLKNFFHHFHSKRGMWVNSNSEKKEK
FT                   "
XX
SQ   Sequence 847 BP; 270 A; 149 C; 208 G; 220 T; 0 other; 3617531716 CRC32;
     aggctactcc ctgttgcgtg tggtgaatgt tgtgaagcgt gaagacaagg acttgggcag        60
     ccgttatctg gtggaactgg aacttgtgga cccacagggt caaactgtcc ttgtttcacg       120
     ttacatttat gcacaagatg aaaattcgtc aaaaccagca cttctctgca gtccaaaagc       180
     tttcaactgg aatccatctg ctactgttca cataattgtt gcagtgaaag atcaagccag       240
     atggatcata cagtttattc gggaaatgga aaaaatatac caagcaactg gggacaaaaa       300
     ctttaatgta ataattgtag attacaacag ctctgacata aatattgaga aacgactaga       360
     aatggctaaa ttacccagtt acaaactgaa gaagatgggg ggtaattttg agagatcagg       420
     tggacttcag gctggaatag accttgttga agatgagcac agtattttgt ttctgtgtga       480
     cctgcatctc tactacccag tgacaataat aaacagtatt cgaaaacact gcgttgaggg       540
     aaagatggtg tatgcccctg ttgtgatgag attggattgt ggtgcttctc caagaacccc       600
     aaatggtttt tgggaaattg ctggttatgg actgatggga atctacaagt ccgacatgga       660
     ccgaattggt ggcatgaaca ccgtagaatt caaggacaaa tggggaggtg aagactggga       720
     gttactagac cgagtcttag ggaatgggtt agaggtagag cgactccatc tgaaaaactt       780
     tttccatcat ttccactcca aacgtggaat gtgggtaaac agcaattcag aaaaaaagga       840
     aaaataa                                                                 847
//
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