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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAM36360; SV 1; linear; genomic DNA; STD; INV; 1098 BP.
XX
PA   CU457741.1
XX
DE   Caenorhabditis elegans C. elegans protein C42C1.5, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1098
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C42C1"
FT   CDS             complement(join(CU457741.1:17733..17825,
FT                   CU457741.1:17883..17987,CU457741.1:18382..18500,
FT                   CU457741.1:18549..19329))
FT                   /gene="tag-335"
FT                   /locus_tag="C42C1.5"
FT                   /standard_name="C42C1.5"
FT                   /product="C. elegans protein C42C1.5, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans TAG-335 protein; contains similarity to
FT                   Pfam domains PF00132 (Bacterial transferase hexapeptide
FT                   (three repeats)) (5), PF00483 (Nucleotidyl transferase)
FT                   contains similarity to Interpro domains IPR001451
FT                   (Bacterial transferase hexapeptide repeat), IPR005835
FT                   (Nucleotidyl transferase), IPR018357 (Hexapeptide
FT                   transferase, conserved site)"
FT                   /db_xref="GOA:A3QMC8"
FT                   /db_xref="InterPro:IPR005835"
FT                   /db_xref="UniProtKB/Swiss-Prot:A3QMC8"
FT                   /db_xref="WormBase:WBGene00016583"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAM36360.1"
FT                   /translation="MKALILVGGYGTRLRPLTLTQPKPLVEFANKPMMLHQMEALAEVG
FT                   VDTVVLAVSYRAEQLEQEMTVHADRLGVKLIFSLEEEPLGTAGPLALARKHLEGDAPFF
FT                   VLNSDVICDFPFKQMVEFHKNHGKEGTIAVTKVEEPSKYGVVVFDQDKGKIDDFVEKPQ
FT                   EYVGNKINAGLYIFSSKILDRIPLKPTSIEKEIFPEMAFSGNLYAFVLPGFWMDVGQPK
FT                   DFLKGMSLFLNHCHTTKSDKLETGSNIHPTATIRGNVMVDPSATVGENCVIGPDVVIGP
FT                   RVKIEGGVRILHSTILSDSSIGNYSWVSGSIVGRKCHIGSWVRIENICVIGDDVVVKDE
FT                   LYLNGASVLPHKSIAVNVPSKDIIM"
XX
SQ   Sequence 1098 BP; 326 A; 207 C; 258 G; 307 T; 0 other; 1344268847 CRC32;
     atgaaggcgc tgattctagt cggaggatac ggaacacggt tgaggccgct tacactaacc        60
     cagccaaaac ctctggtcga atttgccaac aagccgatga tgttgcatca gatggaagcg       120
     ttggctgaag taggagtcga tacagttgtt ctcgctgtca gttacagagc agaacagttg       180
     gagcaagaaa tgacagttca tgcagataga cttggagtca aactgatatt ctctttagaa       240
     gaggaacctc tgggaactgc tggcccactg gctcttgctc gaaaacattt ggaaggcgat       300
     gcaccgtttt tcgttttgaa cagcgacgta atttgtgatt ttcccttcaa acaaatggtt       360
     gaattccaca agaatcacgg aaaagaagga acaattgccg ttacaaaagt agaagaacca       420
     tcgaaatatg gagtagtagt tttcgatcaa gataaaggaa aaattgatga ttttgtggag       480
     aaaccacagg aatacgttgg taacaagatc aatgcaggtc tctacatttt tagctccaaa       540
     attctcgacc gcatcccact gaaacctact agtatcgaga aggaaatttt ccccgaaatg       600
     gcattctctg gaaatttgta cgcttttgta cttcctggct tttggatgga tgtaggtcaa       660
     ccgaaagatt ttctcaaagg aatgtccctt ttcctaaatc attgtcatac tacaaaatcc       720
     gataaactcg aaacaggatc aaacatacat ccaacagcta ctattcgtgg aaatgtgatg       780
     gttgacccat cggctactgt tggagaaaat tgtgtgattg ggccagatgt cgttattggt       840
     ccacgtgtga agatcgaagg tggagttcga atcctgcact cgacaattct ttccgattcg       900
     tcaattggca actattcatg ggtttctgga agtatagttg gtcgaaaatg tcacattgga       960
     agctgggttc gtatcgagaa tatttgtgtt attggagatg atgtggttgt aaaggatgaa      1020
     ttatatctca acggtgccag tgtcttgcca cacaagtcga ttgctgtgaa tgttccgtcg      1080
     aaagacatta ttatgtaa                                                    1098
//
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