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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAM13157; SV 2; linear; genomic DNA; STD; VRT; 825 BP.
XX
PA   CR392021.10
XX
DE   Danio rerio (zebrafish) partial novel protein similar to vertebrate
DE   UDP-N-acetyl-alpha-D-galactosamine:polypeptide
DE   N-acetylgalactosaminyltransferase 9 (GalNAc-T9) (GALNT9)
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..825
FT                   /organism="Danio rerio"
FT                   /chromosome="5"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="CHORI-211"
FT                   /clone="CH211-126H20"
FT   CDS             join(CR392021.10:66277..66443,CR392021.10:94707..94873,
FT                   CR392021.10:106324..106498,CR392021.10:142317..142514,
FT                   CR392021.10:160172..>160289)
FT                   /locus_tag="CH211-126H20.1-001"
FT                   /standard_name="OTTDARP00000016117"
FT                   /product="novel protein similar to vertebrate
FT                   UDP-N-acetyl-alpha-D-galactosamine:polypeptide
FT                   N-acetylgalactosaminyltransferase 9 (GalNAc-T9) (GALNT9)"
FT                   /note="match: proteins: Sw:Q9GM01 Sw:Q9HCQ5 Tr:Q7TQL0"
FT                   /db_xref="GOA:A2CEE9"
FT                   /db_xref="InterPro:IPR001173"
FT                   /db_xref="UniProtKB/TrEMBL:A2CEE9"
FT                   /protein_id="CAM13157.2"
FT                   /translation="MGLVEGPGGLGQGGAAATLGEDSRETEGRFEEYGYNAQLSDRISL
FT                   DRNIPDYRPKKCKQLTYSDDLPQISVVFIFVNEALSVILRSVHSMVNHTPAHLLKEIIL
FT                   VDDNSDSVELKFNLDHYVNKRYPGLVKIVRNSKREGLIRARIHGWNAATAPVVGFFDAH
FT                   VEFNTAWAEPILTRVKEDHTRIILPAIDNIKYNTFEVQQYANAAHGYNWGLWCMYIIPP
FT                   QDWLDRGDETAPIRTPAMIGCSFVVDREYFGEIGLLDPGMEVYGGENIELGMR"
XX
SQ   Sequence 825 BP; 208 A; 194 C; 233 G; 190 T; 0 other; 2342463457 CRC32;
     atgggtctgg tggagggtcc tggaggtcta ggacagggcg gtgctgctgc cacgctggga        60
     gaggacagcc gggagactga agggagattc gaggagtatg gctacaacgc tcagctgagt       120
     gaccgcatct ccttggacag gaatattccg gactacaggc ccaaaaagtg taagcagctg       180
     acctactccg atgaccttcc ccagatctct gtggtcttca tctttgtgaa cgaagctctt       240
     tctgtcatcc ttcgctcagt tcacagcatg gtcaaccaca ctccggcaca tctgctcaaa       300
     gaaatcatcc tggtggatga caacagcgac agcgtggagc taaagttcaa tctggatcat       360
     tatgtgaata aacgatatcc tggcctggtg aagatcgtga ggaacagtaa gagagaaggc       420
     ctcattcgtg ccaggattca cggctggaac gcagccactg ctcctgttgt aggcttcttt       480
     gacgctcacg tggagttcaa cacagcctgg gctgagccga tcctcaccag agtgaaagaa       540
     gatcacacta ggataatcct ccctgcgata gataatatca agtacaatac ctttgaggtg       600
     cagcaatacg ctaatgcggc tcatggctac aactggggcc tgtggtgcat gtacatcatc       660
     ccgcctcagg attggctgga cagaggagat gaaactgctc caatcaggac tccagcaatg       720
     atcggctgct cttttgtagt ggatcgtgaa tattttggag agatcggtct gcttgatccg       780
     ggcatggagg tctatggagg agagaacatt gaacttggga tgagg                       825
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