spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL77853; SV 1; linear; genomic DNA; STD; PRO; 864 BP.
XX
PA   CU234118.1
XX
DE   Bradyrhizobium sp. ORS278 2-dehydro-3-deoxyphosphooctonate aldolase
DE   (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase; KDO-8-phosphate
DE   synthetase, KDOPS)
XX
OS   Bradyrhizobium sp. ORS278
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
OX   NCBI_TaxID=114615;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Bradyrhizobium sp. ORS278"
FT                   /strain="ORS278"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CU234118.1:4291193..4292056)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="kdsA"
FT                   /locus_tag="BRADO4101"
FT                   /product="2-dehydro-3-deoxyphosphooctonate aldolase
FT                   (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase;
FT                   KDO-8-phosphate synthetase, KDOPS)"
FT                   /function="1.6.5 : K antigen"
FT                   /function="6.1 : Membrane"
FT                   /function="6.2 : Peptidoglycan (murein)"
FT                   /function="6.3 : Surface antigens (ECA, O antigen of LPS)"
FT                   /function="6.7 : Capsule (M and K antigens)"
FT                   /function="7.1 : Cytoplasm"
FT                   /EC_number="2.5.1.55"
FT                   /note="Evidence 2a : Function of homologous gene
FT                   experimentally demonstrated in an other organism; PubMedId
FT                   : 12955602, 10220877; Product type e : enzyme"
FT                   /db_xref="GOA:A4YVC7"
FT                   /db_xref="InterPro:IPR006269"
FT                   /db_xref="UniProtKB/Swiss-Prot:A4YVC7"
FT                   /inference="ab initio prediction:AMIGene:2.0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL77853.1"
FT                   /translation="MNAPISAAPVVTAGSVRFGNQLPLAVIAGPCQLESRGHALEVASA
FT                   LKEIATRLNISLVYKTSFDKANRTSGSAARGLGLAQSLPIFAEIRSSLGLPVLTDVHDA
FT                   SQCAEVAQAVDILQIPAFLCRQTDLLLAAAATGKVVNVKKGQFLAPWDMANVVAKITGA
FT                   GNPNVLATERGVSFGYNTLISDMRSLPIMAKTTGAPVIFDATHSVQQPGGQGTSSGGQR
FT                   EFVPVLARAAVAVGVAGVFIETHPDPDHAPSDGPNMVPLAQFEGLLRTLMAFDALAKGQ
FT                   AADAIR"
XX
SQ   Sequence 864 BP; 130 A; 305 C; 288 G; 141 T; 0 other; 1290813081 CRC32;
     gtgaacgctc cgatctccgc cgcaccggtc gtgactgccg gctccgtccg cttcggcaat        60
     caactgccgc tggcggtgat cgcaggtccc tgccagctcg aaagccgcgg ccacgcgctc       120
     gaggtcgcct cggcgctgaa ggagatcgcg acgcggctga acatcagcct cgtctacaag       180
     acctcgttcg acaaggccaa ccgcacctct ggctccgccg cgcgtgggct cgggcttgcg       240
     caatcgctgc cgatcttcgc cgagatccgg tcgtcgctcg gtcttcccgt gctgaccgac       300
     gtgcatgatg ccagccaatg cgccgaggtg gcgcaggcgg tcgacatcct gcagatcccg       360
     gccttcctgt gccggcagac ggatctgctg ctcgcagcgg ccgcgaccgg caaggtcgtc       420
     aacgtcaaga agggccagtt cctggcgccc tgggacatgg cgaacgtcgt cgccaagatc       480
     accggcgccg gcaatcccaa cgtgctggcg accgagcgcg gcgtctcgtt cggctacaac       540
     acgctcatct cggacatgcg gtcgctgccg atcatggcga agacgaccgg cgcgccggtc       600
     atcttcgatg cgacgcattc ggtgcagcag ccgggcgggc agggcacctc gtcgggcggc       660
     cagcgcgaat tcgtccccgt gctcgcacgc gcggccgtgg cggtcggcgt ggccggcgtg       720
     ttcatcgaga cccatcccga tcccgatcat gcgccctccg acgggccgaa catggtgccg       780
     ctggcgcagt tcgagggact gttgcggacg ctgatggcgt tcgatgcgct cgccaagggg       840
     caggctgcgg acgccatccg ctga                                              864
//
spacer
spacer