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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL35610; SV 1; linear; genomic DNA; STD; PRO; 927 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168 putative selenide,water
DE   dikinase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..927
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL111168.1:1439168..1440094)
FT                   /transl_table=11
FT                   /gene="selD"
FT                   /locus_tag="Cj1504c"
FT                   /product="putative selenide,water dikinase"
FT                   /EC_number="2.7.9.3"
FT                   /note="Original (2000) note: Cj1504c, selD, probable
FT                   selenide,water dikinase, len: 308 aa; similar to e.g.
FT                   SELD_ECOLI selenide,water dikinase (selenophosphate
FT                   synthetase) (EC 2.7.9.3) (347 aa), fasta scores; opt: 638
FT                   z-score: 720.3 E(): 8.4e-33, 37.2% identity in 298 aa
FT                   overlap. No Hp match. Contains Pfam match to entry PF00586
FT                   AIRS, AIR synthase related proteins"
FT                   /note="Updated (2006) note: Characterised wihtin
FT                   Escherichia coli with acceptable identity score. Putative
FT                   kept within product function. Functional classification
FT                   -Aminoacyl tRNA synthetases and their modification"
FT                   /note="PMID:2405383, PMID:1527085"
FT                   /db_xref="GOA:Q9PMF9"
FT                   /db_xref="InterPro:IPR004536"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9PMF9"
FT                   /inference="protein motif:Pfam:PF00586"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAL35610.1"
FT                   /translation="MQKTPALLSDIGNNEDASVYQISPDLALVQTLDFITPIVDSAYHF
FT                   GAIAAANALSDVFAMGAEVINALNIVGFDTCNHDLNILKELLEGANDKVKECNALVVGG
FT                   HTIESTELFFGLSVTGKVHPSKFIANNTSKIGDCIILTKPLGTGILSTALKAQMLNQKH
FT                   LDIMLKNMIELNYKASQIALKFHPSAMSDVTGFGLLGHLKEMLNKNISFEIFESELPFL
FT                   DGVKEYFNMGLIPAGAYKNLEFIKELTPDLNEEKLLLCDPQTSGGLLISISEKDSLECL
FT                   KKLEDENIQAKIIAKVVNKQENDIIIS"
XX
SQ   Sequence 927 BP; 335 A; 118 C; 160 G; 314 T; 0 other; 2447416148 CRC32;
     atgcaaaaaa ctcctgcttt acttagtgat atcggaaata atgaagatgc aagcgtatat        60
     caaatcagcc ccgatttagc tttggtgcaa acgcttgatt ttatcactcc tatagtagat       120
     agtgcttatc attttggtgc tattgctgca gcaaatgctt taagcgatgt ttttgctatg       180
     ggtgcagagg taattaatgc cttaaatata gtaggttttg atacttgcaa tcatgattta       240
     aacatcttaa aagagctttt agaaggtgca aatgataaag ttaaagaatg taatgcttta       300
     gtcgtgggtg gccatactat agaaagcacc gagctttttt ttggacttag tgttacagga       360
     aaagtacatc ctagtaaatt tattgctaat aatacttcta aaatcggaga ttgtatcatt       420
     ttaaccaagc ctttaggaac aggaatttta agtacagctt taaaggcgca aatgttaaat       480
     caaaaacatt tagatataat gcttaaaaac atgatagagt taaattataa agccagtcaa       540
     attgctctta aatttcatcc aagtgccatg agtgatgtta caggttttgg acttttagga       600
     catttaaaag aaatgctaaa taaaaatatt tcttttgaaa tttttgaaag tgaacttcct       660
     tttttagatg gagtaaaaga gtattttaat atgggtttaa ttcctgctgg agcttataaa       720
     aatttagaat ttataaaaga acttacccct gatttaaatg aagaaaaatt attactttgt       780
     gatccacaaa cttcaggagg acttttaatt tctataagtg aaaaagattc cttagaatgt       840
     ttaaaaaaac tagaagatga aaatattcaa gctaaaatta ttgctaaggt tgtaaataag       900
     caagaaaatg atattatcat ttcttaa                                           927
//
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