spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL35497; SV 1; linear; genomic DNA; STD; PRO; 1425 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168 catalase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1425
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             AL111168.1:1322526..1323950
FT                   /transl_table=11
FT                   /gene="katA"
FT                   /locus_tag="Cj1385"
FT                   /product="catalase"
FT                   /EC_number="1.11.1.6"
FT                   /note="Original (2000) note: Cj1385, katA, catalase, len:
FT                   474 aa; 98.5% identical to TR:Q59296 (EMBL:X85130) C.
FT                   jejuni catalase (EC 1.11.1.6) (507 aa), and similar to e.g.
FT                   CATA_BRUAB catalase (498 aa), fasta scores; opt: 2093
FT                   z-score: 2432.5 E(): 0, 65.6% identity in 474 aa overlap.
FT                   56.1% identity to HP0875. Contains PS00437 Catalase
FT                   proximal heme-ligand signature, and Pfam match to entry
FT                   PF00199 catalase"
FT                   /note="Updated (2006) note: Characterised within
FT                   Campylobacter jejuni, so putative not added to product
FT                   function. Functional classification - Detoxification"
FT                   /note="PMID:7670638"
FT                   /db_xref="GOA:Q59296"
FT                   /db_xref="HSSP:1M85"
FT                   /db_xref="InterPro:IPR018028"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q59296"
FT                   /inference="protein motif:Pfam:PF00199"
FT                   /inference="protein motif:Prosite:PS00437"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAL35497.1"
FT                   /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRER
FT                   IPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEVTPLFLRFSTVAGEAGAADAERD
FT                   VRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWS
FT                   LCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGIKNLT
FT                   NQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLTKIWPH
FT                   SFVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRY
FT                   RIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDL
FT                   VLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKIITRALKHFE
FT                   KISPDYAKGIKKALEK"
XX
SQ   Sequence 1425 BP; 534 A; 224 C; 246 G; 421 T; 0 other; 4161255237 CRC32;
     atgaaaaaat tgactaacga ttttggaaac attatagctg ataaccaaaa ttcattaagc        60
     gcaggcgcaa aaggaccttt acttatgcaa gattatcttt tgcttgaaaa acttgctcat       120
     caaaatagag aaagaattcc agaaagaacc gttcatgcta agggaagtgg agcttatggc       180
     gaaataaaaa ttacagcaga cttaagtgct tataccaaag ctaaaatttt tcaaaaaggc       240
     gaagttactc cattattttt acgcttttca acagtagcag gtgaagcagg tgcagcagat       300
     gctgaacgcg atgtgagagg ttttgctatt aaattttaca ctaaagaagg aaactgggac       360
     ttggtaggaa ataacactcc gacattcttc atccgcgatg cttataaatt ccctgatttc       420
     atccatactc aaaaaagaga tccaagaact catctaagaa gtaataatgc tgcttgggat       480
     ttttggagtt tatgtcctga aagtttacat caagtaacca ttcttatgag cgatagagga       540
     attcctgcaa gttatcgtca tatgcatgga tttggaagcc atacttatag ttttattaat       600
     gataaaaatg aaagattttg ggtgaaattc cattttaaaa cccaacaagg gattaaaaat       660
     cttaccaacc aagaagctgc cgagcttata gcaaaagata gagaaagtca tcaaagagat       720
     ctctataatg ctatagaaaa taaagatttt ccaaaatgga aagttcaagt tcaaattctt       780
     gctgaaaaag atatagaaaa acttggattt aatccttttg atttaacaaa aatttggcct       840
     catagttttg tacctttgat ggatataggc gaaatgattc taaacaaaaa tcctcaaaat       900
     tattttaatg aagttgaaca agctgccttt agtccaagca atatcgttcc tggaattggc       960
     tttagccctg ataaaatgtt gcaagctaga attttttcat atcctgatgc acaaagatat      1020
     agaataggaa ctaattatca tcttttacca gtaaatcgtg caaaaagcga agtgaatact      1080
     tacaatgtcg ctggtgctat gaattttgat agttataaaa atgatgctgc ttattatgaa      1140
     ccaaacagct atgataatag cccaaaagaa gacaaaagct atcttgaacc tgatttagtc      1200
     ttagaaggcg tagcacaaag atatgctcca ctagataatg acttttatac tcaaccaaga      1260
     gctttattta atcttatgaa tgatgatcaa aaaactcaac tttttcataa tatcgccgct      1320
     tctatggaag gagttgatga aaaaattatc actagagctt taaaacattt tgaaaaaatt      1380
     tcacctgatt atgcaaaagg aattaaaaaa gctttagaaa aataa                      1425
//
spacer
spacer