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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL34973; SV 1; linear; genomic DNA; STD; PRO; 1296 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168 glutamyl-tRNA synthetase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1296
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL111168.1:791924..793219)
FT                   /transl_table=11
FT                   /gene="gltX"
FT                   /locus_tag="Cj0845c"
FT                   /product="glutamyl-tRNA synthetase"
FT                   /EC_number="6.1.1.17"
FT                   /note="Original (2000) note: Cj0845c, gltX, probable
FT                   glutamyl-tRNA synthetase, len: 431 aa; similar to many e.g.
FT                   SYE_ECOLI glutamyl-tRNA synthetase (EC 6.1.1.17) (471 aa),
FT                   fasta scores; opt: 726 z-score: 808.6 E(): 0, 33.8%
FT                   identity in 447 aa overlap. 51.0% identity to HP0643. Also
FT                   similar to Cj1288c, gltX2, (37.0% identity in 449 aa
FT                   overlap). Contains PS00178 Aminoacyl-transfer RNA
FT                   synthetases class-I signature, and Pfam match to entry
FT                   PF00749 tRNA-synt_1c, tRNA synthetases class I"
FT                   /note="Updated (2006) note: Characterised within
FT                   Escherichia coli with marginal identity score. Appropriate
FT                   motifs present. Putative not added to product function.
FT                   Functional classification - Aminoacyl tRNA synthetases and
FT                   their modification"
FT                   /note="PMID:3015933"
FT                   /db_xref="GOA:Q9PP78"
FT                   /db_xref="HSSP:1J09"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9PP78"
FT                   /inference="protein motif:Pfam:PF00749"
FT                   /inference="protein motif:Prosite:PS00178"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL34973.1"
FT                   /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKAR
FT                   NIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELEAK
FT                   KELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFEPEN
FT                   IDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNKAMTY
FT                   AHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTLEEAIK
FT                   WFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLNKDLAQLAKFYTQETSTI
FT                   KELKEKMQAIFNAKDFGEFETEYKILKELLKDIELFENYEDFKNELLNKSNLKGKKFFM
FT                   PLRIILTGNIHGPELSDLYPYIKNFIHELARI"
XX
SQ   Sequence 1296 BP; 502 A; 192 C; 206 G; 396 T; 0 other; 2970840649 CRC32;
     atgtaccgtt ttgcaccttc tcccacaggt gatatgcaca taggaaattt acgcgcagca        60
     atttttaatt atatctgtgc aagacaaaaa aatatggatt ttatcttacg tattgaagat       120
     actgataagg ctagaaatat agcaggaaaa gaagaagaaa tcaaagaaat tttaaatctt       180
     tttagtattt catggcagca ttactatata caaagtgaaa atttaaaatt ccatcgccaa       240
     atggctttaa aacttgtaag cgaaaaaaaa gcttttgctt gtttttgcac cgaagaagaa       300
     cttgaagcaa aaaaagagct ggctaaaaaa caaggtaaag cttatcgcta cgatggcact       360
     tgtgaaaaac tagccgatat tgatgtttta gaatgtgaaa aaccctttgt tatccgtctt       420
     aaaaaaccta ctcatactat gaaatttact gattttatca aaggcgagct tagttttgag       480
     cctgaaaaca tagattcttt tgtgattatg agaacggata aaactccaac ttataatttt       540
     gcttgtgcgg ttgatgatat gcttgaaaat gtcacttgta ttatacgcgg agaagatcat       600
     gtttcaaaca ctccaaaaca agaacatatc cgcgcaagct taggttataa taaagccatg       660
     acttatgcac acttgcctat cattttaaac gaagaaggtg ttaaaatgag taaaagagaa       720
     gcacattctt ctgtaaaatg gctacttgaa agtggaattt tacctagcgc aatcgcaaat       780
     tatctgatca tgctaggcaa taaaactcct tgtgaaattt ttaccttaga agaggctata       840
     aaatggtttg atatttctaa agtttcaaaa gctcccgcaa gatttgatct taaaaaactc       900
     ttacaaatca atcgtgaaca tatcaaaatg atcaaagatg atgagcttaa taaaatttta       960
     gatttaaaca aagatcttgc acaacttgct aaattttaca ctcaagaaac aagtactata      1020
     aaagaactta aagaaaaaat gcaagctatt tttaacgcaa aagattttgg cgagtttgaa      1080
     acagaatata aaattttaaa agaactctta aaagatattg aactttttga aaattatgaa      1140
     gattttaaaa atgaactttt aaataaaagc aacttaaaag gtaaaaaatt tttcatgcct      1200
     ttaaggataa ttttaacagg aaatatccac ggacctgagc ttagcgatct ttatccttat      1260
     attaaaaatt ttattcacga attagcaagg atttaa                                1296
//
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