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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL34934; SV 1; linear; genomic DNA; STD; PRO; 897 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168 dihydrodipicolinate synthase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..897
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             AL111168.1:758701..759597
FT                   /transl_table=11
FT                   /gene="dapA"
FT                   /locus_tag="Cj0806"
FT                   /product="dihydrodipicolinate synthase"
FT                   /EC_number="4.2.1.52"
FT                   /note="Original (2000) note: Cj0806, dapA, probable
FT                   dihydrodipicolinate synthase, len: 298 aa; simimlar to many
FT                   e.g. DAPA_ECOLI dihydrodipicolinate synthase (EC 4.2.1.52)
FT                   (292 aa), fasta scores; opt: 697 z-score: 792.3 E(): 0,
FT                   38.1% identity in 291 aa overlap. 56.5% identity to HP1013.
FT                   Contains PS00665 and PS00666 Dihydrodipicolinate synthetase
FT                   signatures 1 and 2, and Pfam match to entry PF00701 DHDPS,
FT                   Dihydrodipicolinate synthetase"
FT                   /note="Updated (2006) note: Characterised in Escherichia
FT                   coli with acceptable identity score. Putative not needed to
FT                   product function. Functional classification - Amino acid
FT                   biosynthesis - Aspartate family"
FT                   /note="PMID:3514578, PMID:15158272"
FT                   /db_xref="GOA:Q9PPB4"
FT                   /db_xref="HSSP:1DHP"
FT                   /db_xref="InterPro:IPR002220"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9PPB4"
FT                   /inference="protein motif:Pfam:PF00701"
FT                   /inference="protein motif:Prosite:PS00666"
FT                   /inference="protein motif:Prosite:PS00665"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL34934.1"
FT                   /translation="MDKNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVPV
FT                   GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGI
FT                   LSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIY
FT                   GVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMISALT
FT                   HFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYLAGLIESLEFRLPLCSPSKE
FT                   NFAKIEEVMKKYKIKGF"
XX
SQ   Sequence 897 BP; 323 A; 113 C; 191 G; 270 T; 0 other; 804540415 CRC32;
     atggataaaa atattatcat tggggcgatg acggctctta ttacaccatt taaaaatgga        60
     aaagttgatg agcaaagtta tgcaagattg attaaaagac aaatagaaaa tggcatcgat       120
     gcagtagttc cagtaggaac aacaggagaa agtgcaactt taacccatga agaacataga       180
     acttgcatag aaatagccgt tgagacttgt aaaggaacta aagttaaggt tttagcaggt       240
     gcgggaagta atgcaactca tgaggcagtg ggtttggcta aatttgctaa agagcatggt       300
     gctgatggga ttttaagtgt ggcaccgtat tataataaac ctacgcaaca aggactttac       360
     gagcattata aggctattgc gcaaagtgta gatattcctg tgcttttata taatgttcca       420
     ggaagaacag gttgtgaaat ttcaacggat actattatca agctttttag agattgtgaa       480
     aatatttatg gagtaaaaga agcgagtgga aatatcgata agtgtgtgga tttgcttgca       540
     cacgaaccta gaatgatgct tatttcaggg gaagatgcga tcaattatcc tatactttca       600
     aatggtggaa agggagtgat ttcagtaact tcaaatttat tacccgatat gattagcgct       660
     ttaactcatt ttgctttaga tgaaaattat aaagaagcta aaaaaatcaa tgatgagctt       720
     tataatatca ataaaatttt attttgcgaa agtaatccta ttcctattaa aacggctatg       780
     tatttagctg gattgataga aagtttggaa tttagacttc ctctttgttc tccaagtaag       840
     gaaaattttg ctaaaattga agaagtgatg aaaaaatata agatcaaagg attttaa          897
//
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