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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL34543; SV 1; linear; genomic DNA; STD; PRO; 1347 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168 putative malate:quinone
DE   oxidoreductase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1347
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL111168.1:360241..361587)
FT                   /transl_table=11
FT                   /gene="mqo"
FT                   /locus_tag="Cj0393c"
FT                   /product="putative malate:quinone oxidoreductase"
FT                   /EC_number="1.1.99.16"
FT                   /note="Original (2000) note: Cj0393c, possible
FT                   oxidoreductase, len: 448 aa; some simlarity to MQO_ECOLI
FT                   probable malate:quinone oxidoreductase (548 aa), fasta
FT                   scores; opt: 121 z-score: 223.1 E(): 3.8e-05, 24.6%
FT                   identity in 455 aa overlap. 49.3% identity to HP0086.
FT                   Contains PS00110 Pyruvate kinase active site signature"
FT                   /note="Updated (2006) note: Pfam domain PF06039
FT                   Malate:quinone oxidoreductase (Mqo) protein was identified
FT                   within CDS. Characterised within Helicobacter pylori with
FT                   acceptable identity score. Product modified to more
FT                   specific family member due to motif match and
FT                   characterisation work. Putative kept within product
FT                   function. Functional classification - Misc"
FT                   /note="PMID:10809701"
FT                   /db_xref="GOA:P56954"
FT                   /db_xref="InterPro:IPR006076"
FT                   /db_xref="UniProtKB/Swiss-Prot:P56954"
FT                   /inference="protein motif:Pfam:PF06039"
FT                   /inference="protein motif:Prosite:PS00110"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL34543.1"
FT                   /translation="MSQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAATL
FT                   NSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKMALAV
FT                   GDIECDYMKKRYEEFKELYPYIKFFDKAKIKQIEPKVVLGEDCNQDRPENICAMGVESG
FT                   EVFTTVDFGKMSINLIEQAQKQNKNTFVAFNQEIIHIEKKDDIFILKTSNHQEYHAKSV
FT                   VVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAALHGDP
FT                   DLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDATIRNYI
FT                   FYNYLFELPFVDKSLFVKDAKKIVPSLKASDIYYAKGFGGVRPQVIDKTKGELMLGEAS
FT                   ITETPGIIFNMTPSPGATSCLGNAERDAKLVCNYLGMEFNEDKFSSELL"
XX
SQ   Sequence 1347 BP; 508 A; 196 C; 233 G; 410 T; 0 other; 478840364 CRC32;
     atgagccaac aagaatttga tgtgcttgtc atcggagctg gaatttcagg agcagcatta        60
     ttttacgagc ttgcaagata tacaaatatt aaaaatattg ctttgataga aaaatataat       120
     acagctgcaa cattaaattc taagggaacg agtaattctc aaaccattca ttgtggagat       180
     attgaaacca attatacttt agaaaaagcg cgaaaagtaa aaagaacagc tgatatgata       240
     gttaaatatg gactcatgca aaatgcgcaa aataatttca tgttttctca tcaaaaaatg       300
     gctctagctg ttggagatat agaatgtgat tatatgaaaa aacgctatga agaatttaaa       360
     gaactttatc cttatataaa atttttcgat aaagcaaaaa tcaaacaaat tgaacccaaa       420
     gttgttttag gagaagattg caatcaagat agacctgaaa atatctgcgc catgggtgtt       480
     gaaagcggcg aggtttttac aactgtagat tttgggaaaa tgagtataaa tctaatagaa       540
     caagctcaaa aacaaaataa aaatactttc gttgccttta atcaagaaat tattcacata       600
     gaaaaaaagg atgatatttt tatattaaaa acctcaaatc atcaagaata ccatgccaaa       660
     agcgtagttg tcaatgctgg agcgcactct ttatatttag cacataaaat gaacttaggt       720
     atggataagt cttgttggcc tgttgcagga agtttttatt taaccaaaca aaaactttta       780
     aatggtaagg tttatatggt gcaaaatcct aaacttccat ttgcagctct tcatggagat       840
     cctgatttgc ttgctgatat gaacacccgc tttggaccta ccgcacttgt tattccaaaa       900
     ctagaacgtt atcatggtct aaaatcagtt ccagaatttt ttgaagcact aaaacttgat       960
     aaaactgttt taaaagtaac ttttaatatg tttaaagatg caacaattag aaattacatc      1020
     ttttataatt atctttttga actacctttt gttgataaaa gcttatttgt taaagatgcc      1080
     aaaaaaatag tcccaagtct taaagcaagc gatatttatt atgcgaaagg ttttggaggc      1140
     gtaagaccgc aagttattga taaaactaaa ggagaattaa tgctaggtga agcaagcatc      1200
     acagaaaccc ctggtattat tttcaatatg actccaagtc ctggagcaac aagttgtcta      1260
     ggaaatgctg aaagagatgc aaagcttgta tgtaattacc taggaatgga atttaacgaa      1320
     gataaatttt cttcagaatt attgtaa                                          1347
//
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