spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL34511; SV 1; linear; genomic DNA; STD; PRO; 471 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168 lipoprotein signal peptidase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..471
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             AL111168.1:328473..328943
FT                   /transl_table=11
FT                   /gene="lspA"
FT                   /locus_tag="Cj0361"
FT                   /product="lipoprotein signal peptidase"
FT                   /EC_number="3.4.23.36"
FT                   /note="Original (2000) note: Cj0361, lspA, probable
FT                   lipoprotein signal peptidase, len: 156 aa; similar to e.g.
FT                   LSPA_ECOLI lipoprotein signal peptidase (EC 3.4.23.36) (164
FT                   aa), fasta scores; opt: 216 z-score: 326.7 E(): 6.1e-11,
FT                   32.0% identity in 153 aa overlap. 52.0% identity to HP0074.
FT                   Contains PS00855 Signal peptidases II signature and Pfam
FT                   match to entry PF01252 SPASE_II, Signal peptidase (SPase)
FT                   II, score 144.90, E-value 1.4e-39"
FT                   /note="Updated (2006) note: Four probable transmembrace
FT                   helices identified by TMHMM2.0 within CDS. Pfam domain
FT                   PF01252 Signal peptidase (SPase) II identified within CDS.
FT                   Further support given to product function. Characterised
FT                   within Eschreichia coli with marginal identity score.
FT                   Putative not added to product function. Functional
FT                   classification - Protein and peptide secretion"
FT                   /note="PMID:6378662, PMID:15919996"
FT                   /db_xref="GOA:Q0PBE9"
FT                   /db_xref="InterPro:IPR001872"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0PBE9"
FT                   /inference="protein motif:TMHMM:2.0"
FT                   /inference="protein motif:Pfam:PF01252"
FT                   /inference="protein motif:Prosite:PS00855"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL34511.1"
FT                   /translation="MAKTFKFIFYFWGAFVLVFALDQWVKSLTLAGFRWQSEYLDLTYA
FT                   LNTGVAFSMLSFLEHNLKYLHLALIGVLFIYLFWQRTLLKTHSIAFGMMLGAGVSNLLD
FT                   RFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
XX
SQ   Sequence 471 BP; 140 A; 49 C; 89 G; 193 T; 0 other; 197366140 CRC32;
     atggctaaaa cttttaaatt tattttttat ttttggggtg cctttgtttt ggtttttgcc        60
     cttgatcaat gggtaaaatc cttaacttta gcaggattta gatggcagag tgaatactta       120
     gatttaactt atgctctaaa tacaggcgta gctttttcaa tgttgagttt tttagaacat       180
     aatttaaaat atttacatct tgctttaatt ggcgtgcttt ttatttatct tttttggcaa       240
     agaacacttt taaaaactca tagcatagct tttggaatga tgcttggtgc cggcgtttca       300
     aatttattgg atcgttttat acatggaggt gtagtggata tgtttttttg gcataaatgg       360
     tttaattttg ctatttttaa tgttgcagat gtcatgataa atataagtgt ggctttgatt       420
     ttaatacaag aaatatttaa aaaaaggaaa aaagatgaca gaatggatta a                471
//
spacer
spacer