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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL34479; SV 1; linear; genomic DNA; STD; PRO; 975 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168
DE   3-oxoacyl-[acyl-carrier-protein] synthase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..975
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL111168.1:298883..299857)
FT                   /transl_table=11
FT                   /gene="fabH"
FT                   /locus_tag="Cj0328c"
FT                   /product="3-oxoacyl-[acyl-carrier-protein] synthase"
FT                   /note="Original (2000) note: Cj0328c, fabH, probable
FT                   3-oxoacyl-[acyl-carrier-protein] synthase, len: 324 aa;
FT                   highly simlar to many e.g.FABH_ECOLI
FT                   3-oxoacyl-[acyl-carrier-protein] synthase III (317
FT                   aa),fasta scores; opt: 978 z-score: 1555.6 E(): 0, 48.2%
FT                   identity in 309 aa overlap. 59.8% identity to HP0202. Also
FT                   similar to Cj1303 (31.9% identity in 339 aa overlap)"
FT                   /note="Updated (2006) note: Characterised within
FT                   Escherichia coli with acceptable identity score. Putative
FT                   not added to product function. Functional classification
FT                   -Fatty acid biosynthesis"
FT                   /note="PMID:1551888"
FT                   /db_xref="GOA:Q9PIH1"
FT                   /db_xref="HSSP:1HNK"
FT                   /db_xref="InterPro:IPR004655"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9PIH1"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL34479.1"
FT                   /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERRI
FT                   ASENENTSDLGTKAALKAIERANLKPEDIDAILVATLSPDYFTMPSTACKIASNLGLVN
FT                   ISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFGDGA
FT                   GAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSSLCQTLSMQMKGNEVFKIAVNTL
FT                   SNDVVEILAKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGNTSAAS
FT                   IPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENF"
XX
SQ   Sequence 975 BP; 345 A; 145 C; 185 G; 300 T; 0 other; 2837036376 CRC32;
     atgcttaaag ccagtcttaa aagtatagct tcttatattc cagaaaaaat tttaagcaat        60
     gctgatcttg aaaaaatggt agataccacc gatgaatgga tcactagacg cacaggtatt       120
     aaagaaaggc gcattgctag tgaaaatgaa aatactagcg atttgggcac aaaagctgca       180
     ttaaaagcca tagaaagagc aaatttaaaa cctgaagata ttgatgcgat tcttgtagct       240
     actttaagtc ctgattattt tactatgcct tcaacggctt gtaaaattgc ttcaaattta       300
     ggacttgtaa atattagcgc ttttgatatt tcagcagctt gttctggttt tatctatttg       360
     cttgaacaag ctaaagcctt agtagaaagt ggtttgaaaa aaaatgtttt aatcatagga       420
     gctgaaaaaa caagttcaat tatggattac aatgacagaa gtatttgcat actctttgga       480
     gacggtgcag gtgctggagt tgtaagtttg gataatgaaa atcatatcct tgatgtacat       540
     actgcaagca atggtaatta tggagatctt ttaatgactc aaagatcgca aaaatcaagc       600
     ctatgtcaaa cactttctat gcaaatgaaa ggcaatgaag tttttaaaat agcagtaaac       660
     acgcttagta atgatgttgt agaaatttta gctaaaaata acattttagc acaagaaatt       720
     gatcttttta ttcctcatca agctaatcta cgcatcatta aagccgtcca agaaaaactc       780
     aatctaagcg atgaaaaatg tgtgatcact gtacaaaaat atggcaatac ttcagctgct       840
     tctataccta tggcaatgaa tgatgcctat gaagaaggtc gacttaaaaa aggaaatctg       900
     atcttactag atgcttttgg cggtggtttt acttggggat ctgcgctttt aaaatttgga       960
     ggagagaatt tttaa                                                        975
//
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