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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL34441; SV 1; linear; genomic DNA; STD; PRO; 1095 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168 lipid-A-disaccharide synthase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1095
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL111168.1:265431..266525)
FT                   /transl_table=11
FT                   /gene="lpxB"
FT                   /locus_tag="Cj0288c"
FT                   /product="lipid-A-disaccharide synthase"
FT                   /EC_number="2.4.1.182"
FT                   /note="Original (2000) note: Cj0288c, lpxB, probable
FT                   lipid-A-disaccharide synthase, len: 364 aa; similar to e.g.
FT                   LPXB_ECOLI lipid-A-disaccharide synthase (EC 2.4.1.182)
FT                   (382 aa), fasta scores; opt: 153 z-score: 432.6 E():
FT                   7.7e-17, 27.7% identity in 343 aa overlap. 42.8% identity
FT                   to HP0867"
FT                   /note="Updated (2006) note: Pfam domain PF02684
FT                   Lipid-A-disaccharide synthetase identified within CDS.
FT                   Further support given to product function. Characterised
FT                   within Escherichia coli with marginal identity score.
FT                   Putative not added to product function. Functional
FT                   classification - Surface
FT                   polysaccharides,lipopolysaccharides and antigens"
FT                   /note="PMID:3316192, PMID:3531165"
FT                   /db_xref="GOA:Q9PIK8"
FT                   /db_xref="InterPro:IPR003835"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9PIK8"
FT                   /inference="protein motif:Pfam:PF02684"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL34441.1"
FT                   /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGEFELHGIYDESLCKEF
FT                   DLNSKPLYSSHEFSAMGFIEVLPLIFKAKKAIKELANLSFTQKINGILCIDSPAFNIPF
FT                   AKALKKAGSKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFNKSTYIGHP
FT                   LLDEIKEFKNQEDINHTFSKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGKKILC
FT                   VPSFNLEKLEVYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVLAYKAK
FT                   AIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYDYKAFFA
FT                   KVDFLKEYLQFGSAKNLAKILNEI"
XX
SQ   Sequence 1095 BP; 399 A; 142 C; 168 G; 386 T; 0 other; 1953895037 CRC32;
     ttgaaaacct ttttagtttg tgctttagag ccttcagcaa atttgcattt aaaagaagtt        60
     ttaaaagctt ataaaaaaga ttttggtgaa tttgaacttc atgggattta tgatgagagt       120
     ttatgcaaag aatttgattt aaattctaaa ccactttata gctcacatga atttagtgct       180
     atgggtttta tagaagtttt acctttgatt ttcaaagcaa aaaaagctat aaaagaactt       240
     gcaaatttaa gctttactca aaaaataaat gggattttat gtatagattc acccgctttt       300
     aacatacctt ttgctaaagc tttaaaaaaa gcaggcagta aaattccacg catttattat       360
     atcttgcctc aagtttgggc gtggaaaaaa ggtcgcatac ctatcataga aagtcatttt       420
     gatattttag cttctatttt gccctttgat aatcaatttt ttaacaaaag cacctatata       480
     ggccatccgc ttttagatga gataaaagaa tttaaaaatc aagaagacat taatcataca       540
     ttttcaaaaa aagatgatga aaaaactata gcctttttac caggttcaag gcgtagtgaa       600
     attaggcgtt taatgcctat ttttaaagaa ctttctcaaa aatttaaggg taaaaaaatt       660
     ctttgcgttc cctcatttaa tcttgaaaaa ttagaagttt atggtgatat tagcgaattt       720
     aagatagaaa gtaacactcc aaaagtgctt aaaaaagctg attttgcctt tatttgtagt       780
     ggaacagcta ctttagaagc agctttagtg ggaactcctt ttgttcttgc ttataaggca       840
     aaggctatcg atatttttat cgcaaaactt tttgtaaaat taaaacatat aggacttgca       900
     aatatttttt gtgatttcgc tggaaaagaa gctttaaatc ctgaattttt acaagataaa       960
     gtcaatgttt taaatttata tgaagcttac aataaatatg attataaggc attttttgct      1020
     aaagttgatt ttttaaaaga atatttacaa tttggaagtg ctaaaaattt agcaaaaatc      1080
     ctaaacgaaa tataa                                                       1095
//
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