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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL34428; SV 1; linear; genomic DNA; STD; PRO; 792 BP.
XX
PA   AL111168.1
XX
DE   Campylobacter jejuni subsp. jejuni NCTC 11168
DE   acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam ine O-acyltransferase
XX
OS   Campylobacter jejuni subsp. jejuni NCTC 11168
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=192222;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..792
FT                   /organism="Campylobacter jejuni subsp. jejuni NCTC 11168"
FT                   /sub_species="jejuni"
FT                   /strain="NCTC 11168"
FT                   /mol_type="genomic DNA"
FT   CDS             AL111168.1:251030..251821
FT                   /transl_table=11
FT                   /gene="lpxA"
FT                   /locus_tag="Cj0274"
FT                   /product="acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam
FT                   ine O-acyltransferase"
FT                   /EC_number="2.3.1.129"
FT                   /note="Original (2000) note: Cj0274, lpxA, probable
FT                   acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine
FT                   O-acyltransferase, len: 263 aa; similar to many e.g.
FT                   LPXA_ECOLI
FT                   acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine
FT                   O-acyltransferase (EC 2.3.1.129) (262 aa), fasta scores;
FT                   opt: 632 z-score: 961.5 E(): 0, 37.4% identity in 254 aa
FT                   overlap. 42.6% identity to HP1375. Contains PS00101
FT                   Hexapeptide-repeat containing-transferases signature and 5x
FT                   Pfam match to entry PF00132 hexapep, Bacterial transferase
FT                   hexapeptide (four repeats)"
FT                   /note="Updated (2006) note: Characterised within
FT                   Escherichia coli with acceptable identity score. Putative
FT                   not added to product function. Functional classification
FT                   -Surface polysaccharides, lipopolysaccharides and antigens"
FT                   /note="PMID:3277952"
FT                   /db_xref="GOA:Q9PIM1"
FT                   /db_xref="HSSP:1LXA"
FT                   /db_xref="InterPro:IPR010137"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9PIM1"
FT                   /inference="protein motif:Pfam:PF00132"
FT                   /inference="protein motif:Prosite:PS00101"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL34428.1"
FT                   /translation="MKKIHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGAR
FT                   ILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDG
FT                   FTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVG
FT                   EGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTLFRQG
FT                   DLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
XX
SQ   Sequence 792 BP; 273 A; 97 C; 171 G; 251 T; 0 other; 3814821843 CRC32;
     atgaaaaaaa ttcatccaag tgcggtgatt gaagagggtg cacaacttgg tgacgatgtt        60
     gtaatagaag cttatgccta tgtaagcaaa gatgctaaaa taggtaataa tgttgtcatc       120
     aaacaaggtg ctcgaattct ttcagataca actataggtg atcattctcg tgtattttct       180
     tatgctatag taggcgatat tcctcaggac atatcttata aagaagagca aaaaagcggt       240
     gttgttatag gaaaaaatgc aactattaga gaatttgcaa cgataaattc aggtacagct       300
     aaaggagatg gttttactcg tataggcgat aatgctttta ttatggctta ttgtcatatt       360
     gctcatgatt gtcttttagg taataatatt attttagcta ataatgcaac tttagcagga       420
     catgtagagc ttggagattt tacagttgta ggcgggctta cacctattca tcaatttgtc       480
     aaagtaggtg agggttgtat gatagcagga gcaagtgcac tttctcagga tatagtaccg       540
     ttttgtttag cagaaggaaa tcgtgcaagt attagaagtt taaatttagt aggtattcgt       600
     cgtcgttttg ataaagatga agtagataga cttagcagag cttttaaaac tttatttaga       660
     caaggagact taaaagaaaa tgctaaaaat ttgcttgaaa atcaagaaag tgaaaatgtt       720
     aaaaaaatgt gtcattttat attagaaaca aagcgtggaa ttcctgtcta taggggtaaa       780
     aataatgcct ag                                                           792
//
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