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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL19946; SV 1; linear; genomic DNA; STD; PRO; 711 BP.
XX
PA   AL590842.1
XX
DE   Yersinia pestis CO92 putative ribose 5-phosphate isomerase
XX
OS   Yersinia pestis CO92
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Yersinia.
OX   NCBI_TaxID=214092;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..711
FT                   /organism="Yersinia pestis CO92"
FT                   /strain="CO92"
FT                   /mol_type="genomic DNA"
FT   CDS             AL590842.1:1451517..1452227
FT                   /transl_table=11
FT                   /gene="rpiA"
FT                   /locus_tag="YPO1292"
FT                   /product="putative ribose 5-phosphate isomerase"
FT                   /EC_number="5.3.1.6"
FT                   /note="Similar to Methanobacterium thermoautotrophicum
FT                   probable ribose 5-phosphate isomerase RpiA or NTH608
FT                   SW:RPIA_METTH (P72012) (226 aa) fasta scores: E():
FT                   2.7e-28,40.5% id in 222 aa, and to Mus musculus ribose
FT                   5-phosphate isomerase RpiA or Rpi SW:RPIA_MOUSE (P47968)
FT                   (236 aa) fasta scores: E(): 2.7e-22, 34.7% id in 236 aa"
FT                   /db_xref="GOA:Q8ZGJ9"
FT                   /db_xref="HSSP:1O8B"
FT                   /db_xref="InterPro:IPR004788"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8ZGJ9"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL19946.1"
FT                   /translation="MSNQQNDAKRAAARRVIQDFVFDGMTLGLGSGTTSHFFVRELGQH
FT                   VAKGLQLTCTTTSRATSEVARDVGIELSDPNEMNEIDLTIDGPDEIDRRFNMIKGGGAC
FT                   LLWEKIIAHASKRMICICDETKIVNCLGQFPLPVEIVPFAWKQTERRVERVLAEQGLHH
FT                   VPIIRRMGGGHPVITDSGNFILDCHCGAIITAPEPLEIELNRIPGVVENGLFTREATGM
FT                   VVGYFDGSSYVQLR"
XX
SQ   Sequence 711 BP; 153 A; 170 C; 218 G; 170 T; 0 other; 2940399129 CRC32;
     atgagcaatc aacaaaatga cgccaagagg gctgccgccc gtcgggtgat tcaggatttc        60
     gtgttcgatg gcatgacgtt ggggctgggt tccgggacca cctcgcattt ctttgtgcgc       120
     gaactgggcc agcatgttgc caagggcttg cagttaacct gcaccacaac ttctcgtgcg       180
     acgagcgagg tggcgcgtga cgtgggcatt gagctctcgg atccgaatga gatgaatgag       240
     attgatctga ccatcgacgg cccagatgag attgaccggc ggttcaatat gatcaagggc       300
     ggtggagcct gccttctgtg ggagaaaatt atcgcccatg cctcgaagcg gatgatttgt       360
     atttgtgatg agacaaaaat cgtcaattgc ttggggcaat ttccgctgcc agtcgaaatc       420
     gtcccctttg cctggaaaca gaccgaacgc agggtcgagc gggtactcgc ggaacagggt       480
     ctccatcatg tgccgattat tcggcgtatg gggggcgggc acccggtgat cactgacagt       540
     ggaaacttta ttctggattg ccattgcggg gcgattatca cggcccctga accgctggaa       600
     atagagctta atcgcattcc gggggtggtt gaaaacggtc ttttcacccg tgaggctacc       660
     ggtatggtgg tgggctattt tgacggttcc tcctacgttc aactgcgata a                711
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