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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL19117; SV 1; linear; genomic DNA; STD; PRO; 798 BP.
XX
PA   AL590842.1
XX
DE   Yersinia pestis CO92 deoxyribose-phosphate aldolase
XX
OS   Yersinia pestis CO92
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Yersinia.
OX   NCBI_TaxID=214092;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..798
FT                   /organism="Yersinia pestis CO92"
FT                   /strain="CO92"
FT                   /mol_type="genomic DNA"
FT   CDS             AL590842.1:457275..458072
FT                   /transl_table=11
FT                   /gene="deoC"
FT                   /gene_synonym="dra"
FT                   /gene_synonym="thyR"
FT                   /locus_tag="YPO0436"
FT                   /product="deoxyribose-phosphate aldolase"
FT                   /EC_number="4.1.2.4"
FT                   /note="Similar to Escherichia coli deoxyribose-phosphate
FT                   aldolase DeoC B4381 SW:DEOC_ECOLI (P00882) (259 aa) fasta
FT                   scores: E(): 6e-84, 78.491% id in 265 aa, and to Vibrio
FT                   cholerae deoxyribose-phosphate aldolase Vc2350 TR:Q9KPL7
FT                   (EMBL:AE004305) (259 aa) fasta scores: E(): 8.3e-76,75.934%
FT                   id in 241 aa"
FT                   /db_xref="GOA:Q8ZIQ4"
FT                   /db_xref="HSSP:1JCL"
FT                   /db_xref="InterPro:IPR002915"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8ZIQ4"
FT                   /inference="similar to sequence:INSDC:AE004305"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL19117.1"
FT                   /translation="MTDLTACAHLNDYAKRALSLMDLTTLNDDDTDEKVIALCHQAKSP
FT                   AGNTAAICIYPRFIPVARKALREQGTPEIRIATVTNFPHGNDDVAIALAETRAAIAYGA
FT                   DEVDVVFPYRALMAGNDKIGFELVKTCKEACAAANVLLKVIIETGELKQAHLIRQASEI
FT                   AIKAGADFIKTSTGKVPVNATLESADIMIRTIRELGVGETVGFKPAGGVRTAEDAAQFL
FT                   QLADQLMGEGWADARHFRFGASSLLASLLTTLGHQSNANSSGY"
XX
SQ   Sequence 798 BP; 196 A; 191 C; 210 G; 201 T; 0 other; 260675342 CRC32;
     atgaccgatt taaccgcctg cgcgcatttg aacgattatg ctaaacgcgc actaagtttg        60
     atggatttaa ccaccctgaa tgacgacgat actgatgaaa aagtgatcgc gctctgtcat       120
     caggctaaaa gcccggccgg taataccgcg gcaatttgta tttatcctcg ctttatcccg       180
     gttgcccgta aggcgttacg tgagcagggc actcctgaga tccgtatcgc aacggtgacc       240
     aacttccctc atggcaatga tgatgttgcg attgcgttgg ctgaaacccg tgctgccatt       300
     gcttatggtg ccgatgaagt ggatgtggtt ttcccttatc gcgcgttaat ggccggtaac       360
     gataaaattg gcttcgaact cgtgaaaacg tgtaaagaag cctgcgctgc ggcgaatgta       420
     ttactgaaag tcatcattga aactggcgaa cttaagcaag cgcatttaat tcgtcaggcc       480
     tctgaaattg caatcaaagc gggtgccgat tttattaaaa cttctaccgg taaagtgccg       540
     gtgaatgcca cgttggaaag tgcagacatt atgatccgca ctatccgtga gttaggcgta       600
     ggcgaaacgg tgggcttcaa accggctggt ggtgtccgta ccgcagaaga tgccgcgcaa       660
     tttttgcaat tggctgatca actgatgggg gaaggctggg ctgatgcacg ccatttccgc       720
     tttggcgctt ccagtctact cgccagtttg ctgaccacat tgggtcacca gagtaacgcc       780
     aacagcagcg gctactaa                                                     798
//
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