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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL18042; SV 1; linear; genomic DNA; STD; PRO; 1080 BP.
XX
PA   AM286690.1
XX
DE   Alcanivorax borkumensis SK2 glycine cleavage system T protein
XX
OS   Alcanivorax borkumensis SK2
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
OC   Alcanivoracaceae; Alcanivorax.
OX   NCBI_TaxID=393595;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1080
FT                   /organism="Alcanivorax borkumensis SK2"
FT                   /strain="SK2"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AM286690.1:2934243..2935322)
FT                   /transl_table=11
FT                   /gene="gcvT"
FT                   /locus_tag="ABO_2594"
FT                   /product="glycine cleavage system T protein"
FT                   /function="the glycine cleavage system catalyzes the
FT                   degradation of glycine. (6S)-tetrahydrofolate +
FT                   S-aminomethyldihydrolipoylprotein =
FT                   (6R)-5,10-methylenetetrahydrofolate + NH(3) +
FT                   dihydrolipoylprotein."
FT                   /EC_number="2.1.2.10"
FT                   /note="(glycine cleavage system T protein,
FT                   aminomethyltransferase) identified by sequence similarity;
FT                   putative identified by match to TIGRFAM protein family
FT                   HMMTIGR00528 InterPro: Glycine cleavage T-protein
FT                   (aminomethyl transferase)"
FT                   /note="High confidence in function and specificity"
FT                   /db_xref="GOA:Q0VLA6"
FT                   /db_xref="InterPro:IPR006223"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0VLA6"
FT                   /inference="protein motif:HMMTIGR:HMMTIGR00528"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL18042.1"
FT                   /translation="MAHRTALYDAHLAAGGKMVDFGGWDMPINYGSQIEEHHAVRQNAG
FT                   VFDVSHMTVVDIAGAGARDYLRQLLANDVDRIDPGRALYTGMLNDNGGVIDDLIVYKRD
FT                   NDYRLVVNCATRETDLGWMEKHAGGFAVDIHERPELAMLAIQGPKARDILAGLLNGSRA
FT                   DAVKSLKVFAFAEDGDWMIARTGYTGEDGVEIMLPNADALTLWEQLLEAGVSPIGLGAR
FT                   DTLRLEAGLNLYGNDMDESITPWEANMGWTVMLNDREFIGRQPLLNQKENGHSEQVGLI
FT                   LEGKGVLRAHQKVLMPNGEEGEITSGTFSPTLGKSIALARLPAGATGKVDVEIRNKRQV
FT                   AQVVKPPFVRNGNAVYKEQ"
XX
SQ   Sequence 1080 BP; 241 A; 273 C; 339 G; 227 T; 0 other; 2811553151 CRC32;
     atggctcatc gcacagcttt atacgacgct catctcgccg ccggtggcaa gatggtggat        60
     ttcggcggct gggatatgcc gattaactat gggtcgcaga tcgaagaaca tcacgccgtg       120
     cgccaaaatg ccggtgtgtt cgacgtttct catatgaccg tagtggatat cgccggcgcc       180
     ggcgcccgtg actacttacg ccagctgctg gcaaacgatg tggaccgcat tgatccgggc       240
     cgcgccctgt ataccgggat gcttaacgat aatggcggcg tgatcgatga ccttatcgtc       300
     tacaaacggg acaatgacta ccgtctggtg gtaaattgcg cgacccgtga aaccgatctg       360
     ggctggatgg aaaaacacgc gggcggtttt gccgtggata tccatgagcg tccggaactg       420
     gccatgttgg cgattcaggg gcccaaggcc cgtgacattc tcgctggcct tttgaatggc       480
     agccgcgccg acgcggtgaa aagcctgaaa gtgtttgcct tcgcggaaga cggtgattgg       540
     atgattgccc gcaccggcta caccggtgaa gacggcgtgg aaatcatgct gcctaacgcg       600
     gatgcgctga ccctgtggga gcaactgctt gaagcgggtg tatcgcctat tggcctgggg       660
     gcacgcgata cgctgcgcct ggaagcgggc ttgaatctct acggcaacga tatggatgag       720
     agcattacgc catgggaagc caacatgggt tggaccgtaa tgctcaatga ccgcgagttc       780
     atcggtcgcc agcccctgct aaaccagaaa gaaaatggcc acagcgaaca ggtgggtctg       840
     attttggaag gcaagggtgt attgcgcgcc catcagaaag ttttaatgcc gaatggggaa       900
     gaaggggaaa ttaccagcgg tactttctcg cccacgttag gtaaatccat cgccctggct       960
     cgtttgcctg ccggcgccac cggtaaggtg gatgtggaaa ttcgcaataa acggcaggtg      1020
     gctcaggtgg ttaagccgcc gttcgtgcgt aatggtaacg cggtgtacaa ggaacagtag      1080
//
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